Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC117596950 |
| gene name | NA |
| gene type | misc |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 32633213 ~ 32633711 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC117596950 | True | 336 | V_segment | 0.43 | 2 | 32633213 | 32633711 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nmnat2 | nmnat2,LOC107658365,LOC107563562 | coding | downstream | 905661 | 31710064 ~ 31727552 (-) |
| LOC113540064 | NA | coding | downstream | 1088579 | 31538539 ~ 31544634 (-) |
| psmb5 | psmb5,LOC107668975,LOC108438927,LOC107706341,LOC106569426 | coding | downstream | 1099955 | 31528370 ~ 31533258 (-) |
| LOC113540461 | LOC108267708,LOC107591395 | coding | downstream | 1130835 | 31379473 ~ 31502378 (-) |
| LOC113540063 | LOC108267709 | coding | downstream | 1268942 | 31360647 ~ 31364271 (-) |
| LOC117597140 | NA | coding | upstream | 189847 | 32823558 ~ 32825567 (-) |
| LOC117596924 | NA | coding | upstream | 201328 | 32835039 ~ 32835722 (-) |
| LOC117596934 | NA | coding | upstream | 210390 | 32844101 ~ 32845270 (-) |
| LOC117597141 | NA | coding | upstream | 339074 | 32972785 ~ 32977700 (-) |
| LOC117597142 | NA | coding | upstream | 362645 | 32996356 ~ 32996892 (-) |
| G74640 | NA | non-coding | downstream | 5217 | 32627561 ~ 32627996 (-) |
| LOC117596963 | NA | non-coding | downstream | 430359 | 32202081 ~ 32202854 (-) |
| G74622 | NA | non-coding | downstream | 432409 | 32200365 ~ 32200804 (-) |
| G74619 | NA | non-coding | downstream | 468799 | 32164054 ~ 32164414 (-) |
| LOC117595679 | NA | non-coding | downstream | 506751 | 32125572 ~ 32126462 (-) |
| LOC117596962 | NA | non-coding | upstream | 13570 | 32647281 ~ 32648098 (-) |
| G74646 | NA | non-coding | upstream | 18076 | 32651787 ~ 32652241 (-) |
| LOC117597135 | NA | non-coding | upstream | 24650 | 32658361 ~ 32658922 (-) |
| G74647 | NA | non-coding | upstream | 25821 | 32659532 ~ 32659961 (-) |
| LOC117596968 | NA | non-coding | upstream | 133877 | 32767588 ~ 32769282 (-) |
| LOC117596946 | NA | other | downstream | 429308 | 32203394 ~ 32203905 (-) |
| LOC117597125 | NA | other | downstream | 455089 | 32175807 ~ 32178124 (-) |
| LOC117596948 | NA | other | downstream | 457803 | 32174918 ~ 32175410 (-) |
| LOC113540132 | NA | other | downstream | 463977 | 32168582 ~ 32169236 (-) |
| G74615 | NA | other | downstream | 483416 | 32149195 ~ 32149797 (-) |
| G74644 | NA | other | upstream | 10313 | 32644024 ~ 32644534 (-) |
| LOC117596929 | NA | other | upstream | 28181 | 32661892 ~ 32665420 (-) |
| G74703 | NA | other | upstream | 232235 | 32865946 ~ 32868466 (-) |
| LOC117597171 | NA | other | upstream | 312423 | 32946134 ~ 32947158 (-) |
| LOC117597170 | NA | other | upstream | 316123 | 32949834 ~ 32950494 (-) |
