Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC117596961 |
| gene name | NA |
| gene type | misc |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 32131951 ~ 32132467 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC117596961 | False | 311 | V_segment | 0.43 | 2 | 32131961 | 32132436 |
| TU88430 | True | 352 | TUCP | 0.43 | 2 | 32131951 | 32132467 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nmnat2 | nmnat2,LOC107658365,LOC107563562 | coding | downstream | 404399 | 31710064 ~ 31727552 (-) |
| LOC113540064 | NA | coding | downstream | 587317 | 31538539 ~ 31544634 (-) |
| psmb5 | psmb5,LOC107668975,LOC108438927,LOC107706341,LOC106569426 | coding | downstream | 598693 | 31528370 ~ 31533258 (-) |
| LOC113540461 | LOC108267708,LOC107591395 | coding | downstream | 629573 | 31379473 ~ 31502378 (-) |
| LOC113540063 | LOC108267709 | coding | downstream | 767680 | 31360647 ~ 31364271 (-) |
| LOC117597140 | NA | coding | upstream | 691091 | 32823558 ~ 32825567 (-) |
| LOC117596924 | NA | coding | upstream | 702572 | 32835039 ~ 32835722 (-) |
| LOC117596934 | NA | coding | upstream | 711634 | 32844101 ~ 32845270 (-) |
| LOC117597141 | NA | coding | upstream | 840318 | 32972785 ~ 32977700 (-) |
| LOC117597142 | NA | coding | upstream | 863889 | 32996356 ~ 32996892 (-) |
| LOC117595679 | NA | non-coding | downstream | 5489 | 32125572 ~ 32126462 (-) |
| LOC113540655 | NA | non-coding | downstream | 19540 | 32111586 ~ 32112411 (-) |
| LOC117597180 | NA | non-coding | downstream | 199888 | 31931305 ~ 31932063 (-) |
| LOC117597178 | NA | non-coding | downstream | 222037 | 31908648 ~ 31909914 (-) |
| G74553 | NA | non-coding | downstream | 230394 | 31893851 ~ 31901557 (-) |
| G74619 | NA | non-coding | upstream | 31587 | 32164054 ~ 32164414 (-) |
| G74622 | NA | non-coding | upstream | 67898 | 32200365 ~ 32200804 (-) |
| LOC117596963 | NA | non-coding | upstream | 69614 | 32202081 ~ 32202854 (-) |
| G74640 | NA | non-coding | upstream | 495094 | 32627561 ~ 32627996 (-) |
| LOC117596962 | NA | non-coding | upstream | 514814 | 32647281 ~ 32648098 (-) |
| LOC117596957 | NA | other | downstream | 18496 | 32074383 ~ 32113455 (-) |
| G74607 | NA | other | downstream | 64614 | 32066812 ~ 32067337 (-) |
| LOC117597121 | NA | other | downstream | 220977 | 31905626 ~ 31910974 (-) |
| LOC117597011 | NA | other | downstream | 248344 | 31882943 ~ 31883607 (-) |
| G74550 | NA | other | downstream | 251395 | 31880034 ~ 31880556 (-) |
| LOC117596956 | NA | other | upstream | 11992 | 32144459 ~ 32144943 (-) |
| G74615 | NA | other | upstream | 16728 | 32149195 ~ 32149797 (-) |
| LOC113540132 | NA | other | upstream | 36115 | 32168582 ~ 32169236 (-) |
| LOC117596948 | NA | other | upstream | 42451 | 32174918 ~ 32175410 (-) |
| LOC117597125 | NA | other | upstream | 43340 | 32175807 ~ 32178124 (-) |
