Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC117597199 |
| gene name | NA |
| gene type | misc |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 33109818 ~ 33110318 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| id | description |
|---|---|
| ko05340 | Primary immunodeficiency |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC117597199 | True | 336 | V_segment | 0.43 | 2 | 33109818 | 33110318 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117597007 | NA | coding | downstream | 76157 | 33033018 ~ 33033661 (-) |
| LOC117597142 | NA | coding | downstream | 112926 | 32996356 ~ 32996892 (-) |
| LOC117597141 | NA | coding | downstream | 132118 | 32972785 ~ 32977700 (-) |
| LOC117596934 | NA | coding | downstream | 264548 | 32844101 ~ 32845270 (-) |
| LOC117596924 | NA | coding | downstream | 274096 | 32835039 ~ 32835722 (-) |
| c4h14orf119 | LOC108267721 | coding | upstream | 20769 | 33131087 ~ 33135775 (-) |
| cbln12 | LOC108267329,LOC107591379,LOC107704284,LOC107557939,LOC103040079,LOC108438942,LOC107668986,LOC107738140 | coding | upstream | 55624 | 33165942 ~ 33168027 (-) |
| G74736 | NA | non-coding | downstream | 1180 | 33108129 ~ 33108638 (-) |
| G74731 | NA | non-coding | downstream | 24982 | 33084398 ~ 33084836 (-) |
| G74720 | NA | non-coding | downstream | 78392 | 33031042 ~ 33031426 (-) |
| G74717 | NA | non-coding | downstream | 83972 | 33025421 ~ 33025846 (-) |
| LOC117596966 | NA | non-coding | downstream | 236795 | 32871746 ~ 32873023 (-) |
| G74737 | NA | non-coding | upstream | 4426 | 33114744 ~ 33114997 (-) |
| G74744 | NA | non-coding | upstream | 12274 | 33122592 ~ 33122959 (-) |
| G74748 | NA | non-coding | upstream | 15349 | 33125667 ~ 33125874 (-) |
| LOC117597204 | NA | other | downstream | 8178 | 33101134 ~ 33101640 (-) |
| LOC117597195 | NA | other | downstream | 10330 | 33098751 ~ 33099488 (-) |
| LOC117596990 | NA | other | downstream | 18690 | 33090206 ~ 33091128 (-) |
| LOC117597189 | NA | other | downstream | 26496 | 33082197 ~ 33083322 (-) |
| LOC117597193 | NA | other | downstream | 51456 | 33057498 ~ 33058362 (-) |
| LOC117597144 | NA | other | upstream | 10474 | 33120792 ~ 33125144 (-) |
