G57502


Basic Information

Item Value
gene id G57502
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 157913 ~ 158767 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU67761
tgcagcaGCTGCAGTCTCTGTGTACACTCGTGCACACTGTTGTCTTTCAGTGGGACGTGGAGGTGTTGGCTCAGTCCGCTCTCGGCCGCCTCCAGTCTGCGccgcagagtgtgtgtgagtgtcagcaggttgtgtgtgtgtgtgtgtttggatgtttGGGTCTTCGTGCCCGCGTCCACCACTGTGGTGCCTTTCACCAGCTCCACTTTAACTGGAGTCTGTTGCAACACAGctgtacacatgATGTTAGCAGGCTGTATTTGGGTGATGATTTTGTCGTAGTGCGTCTGTGCGCCGGTGTACTCTGCCTCCATCTTCTTCTTGTCCGCTTCTTCGAACAAGTTGGACTGATGACTGAGACGGCGAAACTCCTCGTAGTGATACTCCAGATTCTTAATGATGTTCCGGTACTCCTCAGGCTTCATCTTAgacaactaacacacacacacacacacacacacacacacacacagcgttacacattacacatacttAACATCTATTCCAATAGTTCTGTGCATATCTCAACTGCATGCACTGATGAGCGATAGGAAGGGAAGTGGGCGTGTCTCCcggctcagtgctcgcagaactgaagtgctctcacgtgcgactgtttctctgtgtttgtgtgcacgcAGTTCACGGCATcttgtgctcatttttaacCACCACGCTCTCTGATACTGCACCTCGTGTTGGATATGGCGCTCGTATCGATGCATCCGTATCCACACCAACATGATCAAACACAAGGTTCACAAAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67761 True 768 lncRNA 0.51 2 157913 158767

Neighbor

gene id symbol gene type direction distance location
bcl10 bcl10 coding downstream 49819 99678 ~ 108094 (-)
ssx2ipa ssx2ip coding downstream 73449 65830 ~ 84464 (-)
LOC113525290 NA coding upstream 19104 177871 ~ 184973 (-)
LOC113525282 LOC108267103 coding upstream 103679 262446 ~ 272620 (-)
LOC117597016 NA coding upstream 144916 303683 ~ 321689 (-)
LOC117597018 NA coding upstream 541282 700049 ~ 704378 (-)
LOC117597015 NA coding upstream 551592 710359 ~ 719607 (-)
G57488 LOC108268216 non-coding downstream 119960 32764 ~ 37953 (-)
G57526 NA non-coding upstream 18551 177318 ~ 177548 (-)
G57706 NA non-coding upstream 24289 183056 ~ 183265 (-)
G57711 NA non-coding upstream 33920 192687 ~ 197666 (-)
G57716 NA non-coding upstream 45206 203973 ~ 207155 (-)
G57723 LOC108267083 non-coding upstream 54574 213341 ~ 256676 (-)
LOC117596995 LOC108268238 other downstream 59796 84815 ~ 98117 (-)
eif2b5 eif2b5,LOC107671691,LOC107567864,LOC107660395 other upstream 121215 279982 ~ 300017 (-)
G57733 NA other upstream 142213 300980 ~ 856952 (-)
LOC117597012 NA other upstream 188292 347059 ~ 497563 (-)
LOC117597013 NA other upstream 216476 375243 ~ 451693 (-)
G57830 NA other upstream 453476 612243 ~ 614243 (-)

Expression


Co-expression Network