Gene
RNA
| Item | Value |
|---|---|
| gene id | G57751 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 591727 ~ 799519 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU68265 | True | 485 | lncRNA | 0.41 | 3 | 591727 | 799519 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117597016 | NA | coding | downstream | 270038 | 303683 ~ 321689 (-) |
| LOC113525282 | LOC108267103 | coding | downstream | 319107 | 262446 ~ 272620 (-) |
| LOC113525290 | NA | coding | downstream | 406754 | 177871 ~ 184973 (-) |
| bcl10 | bcl10 | coding | downstream | 483633 | 99678 ~ 108094 (-) |
| ssx2ipa | ssx2ip | coding | downstream | 507263 | 65830 ~ 84464 (-) |
| LOC117597014 | NA | coding | upstream | 48554 | 848073 ~ 857200 (-) |
| dis3l2 | dis3l2 | coding | upstream | 63859 | 863378 ~ 886395 (-) |
| LOC113524111 | LOC108267115,LOC108415103 | coding | upstream | 125515 | 925034 ~ 933915 (-) |
| LOC113524137 | LOC108267904 | coding | upstream | 137641 | 937160 ~ 942590 (-) |
| LOC113524140 | NA | coding | upstream | 145525 | 945044 ~ 961033 (-) |
| G57820 | NA | non-coding | downstream | 4324 | 557142 ~ 587403 (-) |
| G57827 | NA | non-coding | downstream | 9289 | 581834 ~ 582438 (-) |
| G57763 | NA | non-coding | downstream | 42722 | 354007 ~ 549005 (-) |
| LOC117597020 | NA | non-coding | downstream | 54006 | 535865 ~ 537721 (-) |
| G57810 | NA | non-coding | downstream | 72742 | 492652 ~ 518985 (-) |
| G57848 | NA | non-coding | upstream | 22731 | 822250 ~ 825864 (-) |
| G57849 | NA | non-coding | upstream | 23261 | 822780 ~ 824304 (-) |
| G57850 | NA | non-coding | upstream | 27802 | 827321 ~ 841661 (-) |
| G57742 | NA | non-coding | upstream | 58228 | 857747 ~ 861437 (-) |
| G57861 | NA | non-coding | upstream | 109998 | 909517 ~ 910029 (-) |
| LOC117597012 | NA | other | downstream | 94164 | 347059 ~ 497563 (-) |
| LOC117597013 | NA | other | downstream | 140034 | 375243 ~ 451693 (-) |
| eif2b5 | eif2b5,LOC107671691,LOC107567864,LOC107660395 | other | downstream | 291710 | 279982 ~ 300017 (-) |
| LOC117596995 | LOC108268238 | other | downstream | 493610 | 84815 ~ 98117 (-) |
| G57868 | NA | other | upstream | 186392 | 985911 ~ 1048841 (-) |
| LOC117597039 | NA | other | upstream | 210706 | 1010225 ~ 1029025 (-) |
| G58190 | NA | other | upstream | 892807 | 1692326 ~ 1692997 (-) |
| G58534 | NA | other | upstream | 1271505 | 2071024 ~ 2104011 (-) |
| LOC113523983 | NA | other | upstream | 1405033 | 2204552 ~ 2222099 (-) |
