Gene
RNA
| Item | Value |
|---|---|
| gene id | G57778 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 326345 ~ 357054 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU68294 | True | 293 | lncRNA | 0.45 | 2 | 326345 | 357054 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117597016 | NA | coding | downstream | 4656 | 303683 ~ 321689 (-) |
| LOC113525282 | LOC108267103 | coding | downstream | 53725 | 262446 ~ 272620 (-) |
| LOC113525290 | NA | coding | downstream | 141372 | 177871 ~ 184973 (-) |
| bcl10 | bcl10 | coding | downstream | 218251 | 99678 ~ 108094 (-) |
| ssx2ipa | ssx2ip | coding | downstream | 241881 | 65830 ~ 84464 (-) |
| LOC117597018 | NA | coding | upstream | 342995 | 700049 ~ 704378 (-) |
| LOC117597015 | NA | coding | upstream | 353305 | 710359 ~ 719607 (-) |
| LOC117597014 | NA | coding | upstream | 491019 | 848073 ~ 857200 (-) |
| dis3l2 | dis3l2 | coding | upstream | 506324 | 863378 ~ 886395 (-) |
| LOC113524111 | LOC108267115,LOC108415103 | coding | upstream | 567980 | 925034 ~ 933915 (-) |
| G57727 | NA | non-coding | downstream | 64009 | 222221 ~ 262336 (-) |
| G57723 | LOC108267083 | non-coding | downstream | 69669 | 213341 ~ 256676 (-) |
| G57716 | NA | non-coding | downstream | 119190 | 203973 ~ 207155 (-) |
| G57711 | NA | non-coding | downstream | 128679 | 192687 ~ 197666 (-) |
| G57706 | NA | non-coding | downstream | 143080 | 183056 ~ 183265 (-) |
| G57786 | NA | non-coding | upstream | 3685 | 360739 ~ 361102 (-) |
| G57787 | NA | non-coding | upstream | 7738 | 364792 ~ 827430 (-) |
| G57788 | NA | non-coding | upstream | 17401 | 374455 ~ 497101 (-) |
| G57792 | NA | non-coding | upstream | 24011 | 381065 ~ 503881 (-) |
| G57794 | NA | non-coding | upstream | 31692 | 388746 ~ 474258 (-) |
| eif2b5 | eif2b5,LOC107671691,LOC107567864,LOC107660395 | other | downstream | 26328 | 279982 ~ 300017 (-) |
| LOC117596995 | LOC108268238 | other | downstream | 228228 | 84815 ~ 98117 (-) |
| LOC117597013 | NA | other | upstream | 18189 | 375243 ~ 451693 (-) |
| G57830 | NA | other | upstream | 255189 | 612243 ~ 614243 (-) |
| G57838 | NA | other | upstream | 326434 | 683488 ~ 746031 (-) |
| G57740 | NA | other | upstream | 376501 | 733555 ~ 734771 (-) |
| G57868 | NA | other | upstream | 628857 | 985911 ~ 1048841 (-) |
