Gene
RNA
| Item | Value |
|---|---|
| gene id | G57786 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 360739 ~ 361102 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU68302 | True | 292 | lncRNA | 0.42 | 2 | 360739 | 361102 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117597016 | NA | coding | downstream | 39050 | 303683 ~ 321689 (-) |
| LOC113525282 | LOC108267103 | coding | downstream | 88119 | 262446 ~ 272620 (-) |
| LOC113525290 | NA | coding | downstream | 175766 | 177871 ~ 184973 (-) |
| bcl10 | bcl10 | coding | downstream | 252645 | 99678 ~ 108094 (-) |
| ssx2ipa | ssx2ip | coding | downstream | 276275 | 65830 ~ 84464 (-) |
| LOC117597018 | NA | coding | upstream | 338947 | 700049 ~ 704378 (-) |
| LOC117597015 | NA | coding | upstream | 349257 | 710359 ~ 719607 (-) |
| LOC117597014 | NA | coding | upstream | 486971 | 848073 ~ 857200 (-) |
| dis3l2 | dis3l2 | coding | upstream | 502276 | 863378 ~ 886395 (-) |
| LOC113524111 | LOC108267115,LOC108415103 | coding | upstream | 563932 | 925034 ~ 933915 (-) |
| G57778 | NA | non-coding | downstream | 3685 | 326345 ~ 357054 (-) |
| G57776 | NA | non-coding | downstream | 8054 | 317492 ~ 352685 (-) |
| G57727 | NA | non-coding | downstream | 98403 | 222221 ~ 262336 (-) |
| G57723 | LOC108267083 | non-coding | downstream | 104063 | 213341 ~ 256676 (-) |
| G57716 | NA | non-coding | downstream | 153584 | 203973 ~ 207155 (-) |
| G57787 | NA | non-coding | upstream | 3690 | 364792 ~ 827430 (-) |
| G57788 | NA | non-coding | upstream | 13353 | 374455 ~ 497101 (-) |
| G57792 | NA | non-coding | upstream | 19963 | 381065 ~ 503881 (-) |
| G57794 | NA | non-coding | upstream | 27644 | 388746 ~ 474258 (-) |
| LOC117597025 | NA | non-coding | upstream | 60628 | 421730 ~ 426085 (-) |
| eif2b5 | eif2b5,LOC107671691,LOC107567864,LOC107660395 | other | downstream | 60722 | 279982 ~ 300017 (-) |
| LOC117596995 | LOC108268238 | other | downstream | 262622 | 84815 ~ 98117 (-) |
| LOC117597013 | NA | other | upstream | 14141 | 375243 ~ 451693 (-) |
| G57830 | NA | other | upstream | 251141 | 612243 ~ 614243 (-) |
| G57838 | NA | other | upstream | 322386 | 683488 ~ 746031 (-) |
| G57740 | NA | other | upstream | 372453 | 733555 ~ 734771 (-) |
| G57868 | NA | other | upstream | 624809 | 985911 ~ 1048841 (-) |
