Gene
RNA
| Item | Value |
|---|---|
| gene id | G57799 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 429960 ~ 435673 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| id | description |
|---|---|
| ko04060 | Cytokine-cytokine receptor interaction |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU68324 | True | 248 | lncRNA | 0.41 | 2 | 429960 | 435673 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117597016 | NA | coding | downstream | 108271 | 303683 ~ 321689 (-) |
| LOC113525282 | LOC108267103 | coding | downstream | 157340 | 262446 ~ 272620 (-) |
| LOC113525290 | NA | coding | downstream | 244987 | 177871 ~ 184973 (-) |
| bcl10 | bcl10 | coding | downstream | 321866 | 99678 ~ 108094 (-) |
| ssx2ipa | ssx2ip | coding | downstream | 345496 | 65830 ~ 84464 (-) |
| LOC117597018 | NA | coding | upstream | 264376 | 700049 ~ 704378 (-) |
| LOC117597015 | NA | coding | upstream | 274686 | 710359 ~ 719607 (-) |
| LOC117597014 | NA | coding | upstream | 412400 | 848073 ~ 857200 (-) |
| dis3l2 | dis3l2 | coding | upstream | 427705 | 863378 ~ 886395 (-) |
| LOC113524111 | LOC108267115,LOC108415103 | coding | upstream | 489361 | 925034 ~ 933915 (-) |
| G57793 | NA | non-coding | downstream | 424 | 427215 ~ 429536 (-) |
| LOC117597025 | NA | non-coding | downstream | 3875 | 421730 ~ 426085 (-) |
| G57760 | NA | non-coding | downstream | 8651 | 336270 ~ 421309 (-) |
| G57752 | NA | non-coding | downstream | 35549 | 344571 ~ 394411 (-) |
| G57786 | NA | non-coding | downstream | 68858 | 360739 ~ 361102 (-) |
| G57800 | NA | non-coding | upstream | 4605 | 440278 ~ 479284 (-) |
| LOC117597028 | NA | non-coding | upstream | 6269 | 441942 ~ 443429 (-) |
| G57747 | NA | non-coding | upstream | 16960 | 452633 ~ 698272 (-) |
| G57805 | NA | non-coding | upstream | 19169 | 454842 ~ 501206 (-) |
| G57808 | NA | non-coding | upstream | 35176 | 470849 ~ 471624 (-) |
| eif2b5 | eif2b5,LOC107671691,LOC107567864,LOC107660395 | other | downstream | 129943 | 279982 ~ 300017 (-) |
| LOC117596995 | LOC108268238 | other | downstream | 331843 | 84815 ~ 98117 (-) |
| G57830 | NA | other | upstream | 176570 | 612243 ~ 614243 (-) |
| G57838 | NA | other | upstream | 247815 | 683488 ~ 746031 (-) |
| G57740 | NA | other | upstream | 297882 | 733555 ~ 734771 (-) |
| G57868 | NA | other | upstream | 550238 | 985911 ~ 1048841 (-) |
| LOC117597039 | NA | other | upstream | 574552 | 1010225 ~ 1029025 (-) |
