Gene
RNA
| Item | Value |
|---|---|
| gene id | G57820 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 557142 ~ 587403 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU68351 | False | 375 | lncRNA | 0.45 | 2 | 557142 | 587403 |
| TU68353 | True | 439 | lncRNA | 0.44 | 2 | 557142 | 587403 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117597016 | NA | coding | downstream | 235453 | 303683 ~ 321689 (-) |
| LOC113525282 | LOC108267103 | coding | downstream | 284522 | 262446 ~ 272620 (-) |
| LOC113525290 | NA | coding | downstream | 372169 | 177871 ~ 184973 (-) |
| bcl10 | bcl10 | coding | downstream | 449048 | 99678 ~ 108094 (-) |
| ssx2ipa | ssx2ip | coding | downstream | 472678 | 65830 ~ 84464 (-) |
| LOC117597018 | NA | coding | upstream | 112646 | 700049 ~ 704378 (-) |
| LOC117597015 | NA | coding | upstream | 122956 | 710359 ~ 719607 (-) |
| LOC117597014 | NA | coding | upstream | 260670 | 848073 ~ 857200 (-) |
| dis3l2 | dis3l2 | coding | upstream | 275975 | 863378 ~ 886395 (-) |
| LOC113524111 | LOC108267115,LOC108415103 | coding | upstream | 337631 | 925034 ~ 933915 (-) |
| G57763 | NA | non-coding | downstream | 8137 | 354007 ~ 549005 (-) |
| LOC117597020 | NA | non-coding | downstream | 19421 | 535865 ~ 537721 (-) |
| G57810 | NA | non-coding | downstream | 38157 | 492652 ~ 518985 (-) |
| LOC117597030 | NA | non-coding | downstream | 47139 | 498209 ~ 510003 (-) |
| G57792 | NA | non-coding | downstream | 53261 | 381065 ~ 503881 (-) |
| G57751 | NA | non-coding | upstream | 4324 | 591727 ~ 799519 (-) |
| G57828 | NA | non-coding | upstream | 12219 | 599622 ~ 600276 (-) |
| G57761 | NA | non-coding | upstream | 13223 | 600626 ~ 674488 (-) |
| G57831 | NA | non-coding | upstream | 30882 | 618285 ~ 742153 (-) |
| G57832 | NA | non-coding | upstream | 32302 | 619705 ~ 620138 (-) |
| LOC117597012 | NA | other | downstream | 59579 | 347059 ~ 497563 (-) |
| LOC117597013 | NA | other | downstream | 105449 | 375243 ~ 451693 (-) |
| eif2b5 | eif2b5,LOC107671691,LOC107567864,LOC107660395 | other | downstream | 257125 | 279982 ~ 300017 (-) |
| LOC117596995 | LOC108268238 | other | downstream | 459025 | 84815 ~ 98117 (-) |
| G57830 | NA | other | upstream | 24840 | 612243 ~ 614243 (-) |
| G57838 | NA | other | upstream | 96085 | 683488 ~ 746031 (-) |
| G57740 | NA | other | upstream | 146152 | 733555 ~ 734771 (-) |
| G57868 | NA | other | upstream | 398508 | 985911 ~ 1048841 (-) |
| LOC117597039 | NA | other | upstream | 422822 | 1010225 ~ 1029025 (-) |
