Gene
RNA
| Item | Value |
|---|---|
| gene id | G57877 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 1012914 ~ 1013189 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU68426 | True | 200 | lncRNA | 0.41 | 2 | 1012914 | 1013189 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| higd1a | higd1a,LOC108268302,LOC108442768,LOC107671688 | coding | downstream | 19961 | 986090 ~ 992953 (-) |
| LOC113524120 | NA | coding | downstream | 31271 | 967030 ~ 981643 (-) |
| LOC113524140 | NA | coding | downstream | 51881 | 945044 ~ 961033 (-) |
| LOC113524137 | LOC108267904 | coding | downstream | 70324 | 937160 ~ 942590 (-) |
| LOC113524111 | LOC108267115,LOC108415103 | coding | downstream | 78999 | 925034 ~ 933915 (-) |
| LOC117597040 | NA | coding | upstream | 22403 | 1035592 ~ 1048876 (-) |
| jmjd4 | jmjd4 | coding | upstream | 139727 | 1152916 ~ 1158401 (-) |
| wnt9a | wnt9a,LOC106599874,LOC107711706,LOC107727550 | coding | upstream | 250541 | 1263730 ~ 1292226 (-) |
| c4h1orf35 | c7h1orf35,zgc:63882,cunh1orf35 | coding | upstream | 361066 | 1374255 ~ 1380829 (-) |
| ipp | ipp | coding | upstream | 384785 | 1397974 ~ 1405757 (-) |
| G57861 | NA | non-coding | downstream | 102885 | 909517 ~ 910029 (-) |
| G57742 | NA | non-coding | downstream | 151477 | 857747 ~ 861437 (-) |
| G57850 | NA | non-coding | downstream | 171253 | 827321 ~ 841661 (-) |
| G57848 | NA | non-coding | downstream | 187050 | 822250 ~ 825864 (-) |
| G57849 | NA | non-coding | downstream | 188610 | 822780 ~ 824304 (-) |
| LOC117596994 | NA | non-coding | upstream | 25836 | 1039025 ~ 1040876 (-) |
| G57895 | NA | non-coding | upstream | 62032 | 1075221 ~ 1075426 (-) |
| G57896 | NA | non-coding | upstream | 64502 | 1077691 ~ 1077907 (-) |
| G57935 | NA | non-coding | upstream | 100687 | 1113876 ~ 1114377 (-) |
| G57947 | NA | non-coding | upstream | 161567 | 1174756 ~ 1174971 (-) |
| G57733 | NA | other | downstream | 155962 | 300980 ~ 856952 (-) |
| G57838 | NA | other | downstream | 266883 | 683488 ~ 746031 (-) |
| G57740 | NA | other | downstream | 278143 | 733555 ~ 734771 (-) |
| G57830 | NA | other | downstream | 398671 | 612243 ~ 614243 (-) |
| LOC117597012 | NA | other | downstream | 515351 | 347059 ~ 497563 (-) |
| G58190 | NA | other | upstream | 679137 | 1692326 ~ 1692997 (-) |
| G58534 | NA | other | upstream | 1057835 | 2071024 ~ 2104011 (-) |
| LOC113523983 | NA | other | upstream | 1191363 | 2204552 ~ 2222099 (-) |
| trnag-ucc_1 | NA | other | upstream | 1644814 | 2658003 ~ 2658074 (-) |
| trnag-ucc_2 | NA | other | upstream | 1653578 | 2666767 ~ 2666838 (-) |
