Gene
RNA
| Item | Value |
|---|---|
| gene id | G58650 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 2611416 ~ 2617429 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU69434 | True | 912 | lncRNA | 0.40 | 3 | 2611416 | 2617429 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| greb1l | greb1l | coding | downstream | 263072 | 2284687 ~ 2348344 (-) |
| kiaa0232 | kiaa0232,zgc:158564 | coding | downstream | 418523 | 2175540 ~ 2192893 (-) |
| tbc1d14 | tbc1d14 | coding | downstream | 442765 | 2115603 ~ 2168651 (-) |
| LOC113524117 | NA | coding | downstream | 529660 | 2057472 ~ 2081756 (-) |
| LOC117597042 | NA | coding | upstream | 113357 | 2730786 ~ 2732506 (-) |
| trnag-ucc_10 | NA | coding | upstream | 124328 | 2741757 ~ 2741828 (-) |
| trnag-ucc_11 | NA | coding | upstream | 133769 | 2751198 ~ 2751269 (-) |
| LOC117597045 | NA | coding | upstream | 148089 | 2765518 ~ 2767521 (-) |
| trnag-ucc_12 | NA | coding | upstream | 164848 | 2782277 ~ 2782348 (-) |
| G58645 | NA | non-coding | downstream | 1164 | 2604477 ~ 2610252 (-) |
| G58628 | NA | non-coding | downstream | 43612 | 2535115 ~ 2567804 (-) |
| G58598 | NA | non-coding | downstream | 209112 | 2376593 ~ 2402304 (-) |
| G58585 | NA | non-coding | downstream | 337255 | 2268192 ~ 2274161 (-) |
| LOC117597186 | NA | non-coding | downstream | 380435 | 2228246 ~ 2230981 (-) |
| G58703 | NA | non-coding | upstream | 213743 | 2831172 ~ 2831373 (-) |
| G58704 | grpel1 | non-coding | upstream | 215249 | 2832678 ~ 2834631 (-) |
| LOC113524008 | NA | non-coding | upstream | 227151 | 2844580 ~ 2853974 (-) |
| G58809 | NA | non-coding | upstream | 412274 | 3029703 ~ 3084722 (-) |
| G58832 | NA | non-coding | upstream | 455744 | 3073173 ~ 3073765 (-) |
| LOC113523983 | NA | other | downstream | 389317 | 2204552 ~ 2222099 (-) |
| G58534 | NA | other | downstream | 507405 | 2071024 ~ 2104011 (-) |
| G58190 | NA | other | downstream | 918419 | 1692326 ~ 1692997 (-) |
| G57868 | NA | other | downstream | 1562575 | 985911 ~ 1048841 (-) |
| trnag-ucc_1 | NA | other | upstream | 40574 | 2658003 ~ 2658074 (-) |
| trnag-ucc_2 | NA | other | upstream | 49338 | 2666767 ~ 2666838 (-) |
| trnag-ucc_3 | NA | other | upstream | 54471 | 2671900 ~ 2671971 (-) |
| trnag-ucc_4 | NA | other | upstream | 55342 | 2672771 ~ 2676041 (-) |
| trnag-ucc_9 | NA | other | upstream | 63152 | 2680581 ~ 2726284 (-) |
