Gene
RNA
| Item | Value |
|---|---|
| gene id | G58703 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 2831172 ~ 2831373 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0019825 | oxygen binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU69498 | True | 202 | lncRNA | 0.45 | 1 | 2831172 | 2831373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccdc96 | NA | coding | downstream | 19531 | 2804495 ~ 2811641 (-) |
| trnag-ucc_14 | NA | coding | downstream | 29122 | 2801979 ~ 2802050 (-) |
| trnag-ucc_13 | NA | coding | downstream | 39228 | 2791873 ~ 2791944 (-) |
| trnar-ucu | NA | coding | downstream | 43399 | 2787702 ~ 2787773 (-) |
| trnag-ucc_12 | NA | coding | downstream | 48824 | 2782277 ~ 2782348 (-) |
| LOC113524014 | NA | coding | upstream | 3904 | 2835277 ~ 2841271 (-) |
| ncapg2 | ncapg2 | coding | upstream | 629499 | 3460872 ~ 3486351 (-) |
| LOC117597049 | ncapg2 | coding | upstream | 695120 | 3526493 ~ 3534819 (-) |
| esyt2b | esyt2 | coding | upstream | 706942 | 3538315 ~ 3583012 (-) |
| LOC113525490 | LOC108261092,LOC108261462 | coding | upstream | 873401 | 3704774 ~ 3710547 (-) |
| G58594 | NA | non-coding | downstream | 4282 | 2348719 ~ 2826890 (-) |
| G58648 | NA | non-coding | downstream | 212379 | 2607752 ~ 2618793 (-) |
| G58650 | NA | non-coding | downstream | 213743 | 2611416 ~ 2617429 (-) |
| G58645 | NA | non-coding | downstream | 220920 | 2604477 ~ 2610252 (-) |
| G58628 | NA | non-coding | downstream | 263368 | 2535115 ~ 2567804 (-) |
| G58704 | grpel1 | non-coding | upstream | 1305 | 2832678 ~ 2834631 (-) |
| LOC113524008 | NA | non-coding | upstream | 13207 | 2844580 ~ 2853974 (-) |
| G58809 | NA | non-coding | upstream | 198330 | 3029703 ~ 3084722 (-) |
| G58832 | NA | non-coding | upstream | 241800 | 3073173 ~ 3073765 (-) |
| G58933 | NA | non-coding | upstream | 318114 | 3149487 ~ 3149936 (-) |
| G58696 | NA | other | downstream | 13622 | 2814990 ~ 2817550 (-) |
| trnag-ucc_9 | NA | other | downstream | 104888 | 2680581 ~ 2726284 (-) |
| trnag-ucc_8 | NA | other | downstream | 115071 | 2716030 ~ 2716101 (-) |
| trnag-ucc_7 | NA | other | downstream | 120974 | 2710127 ~ 2710198 (-) |
| trnag-ucc_6 | NA | other | downstream | 125050 | 2706051 ~ 2706122 (-) |
| LOC113523993 | LOC108261096,LOC108261462,LOC108261092 | other | upstream | 276681 | 3108054 ~ 3115054 (-) |
| ptprn2 | ptprn2 | other | upstream | 392524 | 3223897 ~ 3457803 (-) |
| G59069 | NA | other | upstream | 755410 | 3586783 ~ 3590737 (-) |
| si:ch73-174h16.4 | LOC108268225 | other | upstream | 798615 | 3629988 ~ 3639208 (-) |
| LOC117597092 | LOC108261482,LOC108261305,LOC108261462,LOC108268217 | other | upstream | 1063219 | 3894592 ~ 3920131 (-) |
