G61445


Basic Information

Item Value
gene id G61445
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 8728354 ~ 8738480 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU72775
GTCTCATATGATAAAATCTGGAACAAAATCTGAAACGAATcataacttttacatttataagtaATAACATACATTCACTCACCTGATACAGAGAGTGGAACAGGATCACTCGTCTTTGAGATCTGAGAGTCACTTCTCCTCCCTCTGCAGGTGTATTTACCACCGTCAGAGTCTGTAACTGAGCTGATGCTGAACtcctgtgttgttctgtctGAGTAGAGTGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72775 True 226 lncRNA 0.40 2 8728354 8738480

Neighbor

gene id symbol gene type direction distance location
LOC113526862 LOC108267289 coding downstream 160366 8564114 ~ 8567988 (-)
LOC117596993 NA coding downstream 167322 8544276 ~ 8561032 (-)
LOC113526472 NA coding downstream 277356 8447383 ~ 8450998 (-)
efcab14 efcab14 coding downstream 609468 8106893 ~ 8118886 (-)
rpe65a rpe65,rpe65a,LOC108436856,LOC107705134,LOC107708597,LOC107693590 coding downstream 649501 8065202 ~ 8078853 (-)
LOC113524717 LOC107663573 coding upstream 178894 8917374 ~ 8924937 (-)
LOC117597149 NA coding upstream 630242 9368722 ~ 9377012 (-)
LOC113540032 NA coding upstream 645505 9383985 ~ 9389481 (-)
kcnj10a kcnj10,LOC108440277,LOC107728032,LOC107703868,LOC100697257,LOC102205965 coding upstream 652523 9391003 ~ 9412913 (-)
dusp19b dus19 coding upstream 696654 9435134 ~ 9437967 (-)
G61286 NA non-coding downstream 178252 8479903 ~ 8550102 (-)
G61310 vangl2,LOC108268029,LOC107707319,LOC107706024 non-coding downstream 202854 8522890 ~ 8525500 (-)
G61301 NA non-coding downstream 223760 8501656 ~ 8504594 (-)
G61275 NA non-coding downstream 233327 8420940 ~ 8495027 (-)
G61220 NA non-coding downstream 375068 8347156 ~ 8353286 (-)
G61464 NA non-coding upstream 140717 8879197 ~ 8880736 (-)
LOC117597151 NA non-coding upstream 149677 8888157 ~ 8893055 (-)
LOC117597240 NA non-coding upstream 255415 8993895 ~ 8994106 (-)
G61482 NA non-coding upstream 282830 9021310 ~ 9235924 (-)
G61489 NA non-coding upstream 350227 9088707 ~ 9096874 (-)
LOC113526753 LOC108267287,LOC108261139 other downstream 132729 8571496 ~ 8595625 (-)
LOC113526822 LOC108268278 other downstream 176499 8452610 ~ 8551855 (-)
LOC117597002 LOC107721237 other downstream 1829127 6881382 ~ 6899227 (-)
G60166 phlpp1,LOC105899321,LOC101073770,LOC106925929,LOC103142993,LOC103135813 other downstream 2768809 5900249 ~ 5959545 (-)
cldn1 LOC108268314 other downstream 3234315 5478542 ~ 5494039 (-)
G61478 NA other upstream 244754 8983234 ~ 8984453 (-)
LOC113540087 LOC108267275 other upstream 576369 9314849 ~ 9327431 (-)
G61537 NA other upstream 599346 9337826 ~ 9338745 (-)
G61900 NA other upstream 867247 9605727 ~ 10041766 (-)
G61972 actn3,LOC106577856,LOC106608893 other upstream 1037798 9776278 ~ 9805318 (-)

Expression


Co-expression Network