G61489


Basic Information

Item Value
gene id G61489
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 9088707 ~ 9096874 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU72833
GTGTAACAGGATCACTGatctctgagctctgagagtCACTTCTCCTCCCTCTGCAGGTGTATTTACCACCGTCAGAGTCTGTAACTGAGCTGATGCTGAACtcctgtgttgttctgtctGAGTAGAGTGTGTAATCATTCTTATTCCAGCTGTATGTCCACTCagtgtctcctcctctctgtatgtcaCACCTGAaagtcactctctctcctctgaac

Function

GO:

id name namespace
GO:0015103 inorganic anion transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72833 True 218 lncRNA 0.47 2 9088707 9096874

Neighbor

gene id symbol gene type direction distance location
LOC113524717 LOC107663573 coding downstream 163770 8917374 ~ 8924937 (-)
LOC113526862 LOC108267289 coding downstream 520719 8564114 ~ 8567988 (-)
LOC117596993 NA coding downstream 527675 8544276 ~ 8561032 (-)
LOC113526472 NA coding downstream 637709 8447383 ~ 8450998 (-)
efcab14 efcab14 coding downstream 969821 8106893 ~ 8118886 (-)
LOC117597149 NA coding upstream 271848 9368722 ~ 9377012 (-)
LOC113540032 NA coding upstream 287111 9383985 ~ 9389481 (-)
kcnj10a kcnj10,LOC108440277,LOC107728032,LOC107703868,LOC100697257,LOC102205965 coding upstream 294129 9391003 ~ 9412913 (-)
dusp19b dus19 coding upstream 338260 9435134 ~ 9437967 (-)
capn1 capn1,LOC108267277,LOC108440273,LOC107728026,LOC106608991 coding upstream 342476 9439350 ~ 9571464 (-)
LOC117597240 NA non-coding downstream 94601 8993895 ~ 8994106 (-)
LOC117597151 NA non-coding downstream 195652 8888157 ~ 8893055 (-)
G61464 NA non-coding downstream 207971 8879197 ~ 8880736 (-)
G61445 NA non-coding downstream 350227 8728354 ~ 8738480 (-)
G61310 vangl2,LOC108268029,LOC107707319,LOC107706024 non-coding downstream 563207 8522890 ~ 8525500 (-)
LOC117597152 NA non-coding upstream 10654 9107528 ~ 9109965 (-)
G61492 LOC108267340 non-coding upstream 23887 9120761 ~ 9125308 (-)
G61496 NA non-coding upstream 54544 9151418 ~ 9159115 (-)
G61518 NA non-coding upstream 215923 9312797 ~ 9313019 (-)
G61876 NA non-coding upstream 331920 9428794 ~ 9430832 (-)
G61478 NA other downstream 104254 8983234 ~ 8984453 (-)
LOC113526753 LOC108267287,LOC108261139 other downstream 493082 8571496 ~ 8595625 (-)
LOC113526822 LOC108268278 other downstream 536852 8452610 ~ 8551855 (-)
LOC117597002 LOC107721237 other downstream 2189480 6881382 ~ 6899227 (-)
G60166 phlpp1,LOC105899321,LOC101073770,LOC106925929,LOC103142993,LOC103135813 other downstream 3129162 5900249 ~ 5959545 (-)
LOC113540087 LOC108267275 other upstream 217975 9314849 ~ 9327431 (-)
G61537 NA other upstream 240952 9337826 ~ 9338745 (-)
G61900 NA other upstream 508853 9605727 ~ 10041766 (-)
G61972 actn3,LOC106577856,LOC106608893 other upstream 679404 9776278 ~ 9805318 (-)
cxcl19 LOC108267987 other upstream 973532 10070406 ~ 10073229 (-)

Expression


Co-expression Network