G61876


Basic Information

Item Value
gene id G61876
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 9428794 ~ 9430832 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU73304
TAAAACGTTAAGCAGACTACAGAACTTACGAGTGTGTACATGCACATAAACTAACCTGTACTCTGGGGGAAGTTGGGAATGTCTCTGTAGTTGAAGACCACTTGATCTTTCAGCATGTCTGCCAATCCACCCAGACCGGAGCCACAGACGATGCCCACCAGTGGGCGCACTGCAGTCTGAGCCAACAGCCAGTCAGCTGTAGCCCTGCAATCCTCATAGCTGTACCCAGTGTGACTCTCAGGAAACATGACTTTAAAATCGGTCCCAGAAGAAAGTAGCGGATTTGTAAGCCAGGACTATGACTCCAACTCCTAATGTAAACCAAACAACcctatataaaaagaataaaactaaaaactcaAAGCAAAACGTTAAACAAGCCGAGACAGAAGTTAAAACACCCAATTATGTTTAATGTCAGCGTTTAAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73304 True 432 lncRNA 0.44 2 9428794 9430832

Neighbor

gene id symbol gene type direction distance location
kcnj10a kcnj10,LOC108440277,LOC107728032,LOC107703868,LOC100697257,LOC102205965 coding downstream 15881 9391003 ~ 9412913 (-)
LOC113540032 NA coding downstream 39313 9383985 ~ 9389481 (-)
LOC117597149 NA coding downstream 51782 9368722 ~ 9377012 (-)
LOC113524717 LOC107663573 coding downstream 503857 8917374 ~ 8924937 (-)
LOC113526862 LOC108267289 coding downstream 860806 8564114 ~ 8567988 (-)
dusp19b dus19 coding upstream 4302 9435134 ~ 9437967 (-)
capn1 capn1,LOC108267277,LOC108440273,LOC107728026,LOC106608991 coding upstream 8518 9439350 ~ 9571464 (-)
LOC113539885 LOC100379168 coding upstream 43345 9474177 ~ 9484601 (-)
zgc:101810 zgc:101810,LOC108267909,LOC108440263,LOC103038739,LOC107747924,LOC107692827,LOC107377040,LOC105026763 coding upstream 451879 9882711 ~ 9889757 (-)
six7 LOC108267910,LOC108440264,LOC105902948,LOC107567605,LOC105026762,LOC102308987,LOC101481621,LOC107748082,LOC107553799,LOC105933590,LOC103360578 coding upstream 461519 9892351 ~ 9896258 (-)
G61518 NA non-coding downstream 115775 9312797 ~ 9313019 (-)
G61482 NA non-coding downstream 192870 9021310 ~ 9235924 (-)
G61496 NA non-coding downstream 269679 9151418 ~ 9159115 (-)
G61492 LOC108267340 non-coding downstream 303486 9120761 ~ 9125308 (-)
LOC117597152 NA non-coding downstream 318829 9107528 ~ 9109965 (-)
G61881 NA non-coding upstream 17683 9448515 ~ 9454706 (-)
LOC117597234 NA non-coding upstream 68887 9499719 ~ 9499931 (-)
LOC117597233 NA non-coding upstream 72230 9503062 ~ 9503274 (-)
LOC117597212 NA non-coding upstream 75612 9506444 ~ 9506654 (-)
LOC117597224 NA non-coding upstream 76203 9507035 ~ 9507242 (-)
G61537 NA other downstream 90049 9337826 ~ 9338745 (-)
LOC113540087 LOC108267275 other downstream 101363 9314849 ~ 9327431 (-)
G61478 NA other downstream 444341 8983234 ~ 8984453 (-)
LOC113526753 LOC108267287,LOC108261139 other downstream 833169 8571496 ~ 8595625 (-)
LOC113526822 LOC108268278 other downstream 876939 8452610 ~ 8551855 (-)
G61900 NA other upstream 174895 9605727 ~ 10041766 (-)
G61972 actn3,LOC106577856,LOC106608893 other upstream 345446 9776278 ~ 9805318 (-)
cxcl19 LOC108267987 other upstream 639574 10070406 ~ 10073229 (-)
LOC113540372 NA other upstream 647856 10078688 ~ 10080237 (-)
trnan-guu_9 NA other upstream 1055836 10486668 ~ 10486741 (-)

Expression


Co-expression Network