G61881


Basic Information

Item Value
gene id G61881
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 9448515 ~ 9454706 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU73311
ttcatgctgtCTTTTCTCCAAATTCCAAGTTGTATTcctttcattcaaacaaaaaaaaacactaaacttagAATACTGTGATTTGCACTTTTGTGAAATTTGATTAGATAATGTGTGTTACTCTGTCTACACTTCGTTTCTCCACCAAACGCATTTTGGGAAAAACCCAATGAAAGAATTGAAGCCCAATCAGTTTTTAGAATTGGATGAGAATTTCAGCTGCATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73311 True 227 lncRNA 0.33 2 9448515 9454706

Neighbor

gene id symbol gene type direction distance location
dusp19b dus19 coding downstream 10548 9435134 ~ 9437967 (-)
kcnj10a kcnj10,LOC108440277,LOC107728032,LOC107703868,LOC100697257,LOC102205965 coding downstream 35602 9391003 ~ 9412913 (-)
LOC113540032 NA coding downstream 59034 9383985 ~ 9389481 (-)
LOC117597149 NA coding downstream 71503 9368722 ~ 9377012 (-)
LOC113524717 LOC107663573 coding downstream 523578 8917374 ~ 8924937 (-)
LOC113539885 LOC100379168 coding upstream 19471 9474177 ~ 9484601 (-)
zgc:101810 zgc:101810,LOC108267909,LOC108440263,LOC103038739,LOC107747924,LOC107692827,LOC107377040,LOC105026763 coding upstream 428005 9882711 ~ 9889757 (-)
six7 LOC108267910,LOC108440264,LOC105902948,LOC107567605,LOC105026762,LOC102308987,LOC101481621,LOC107748082,LOC107553799,LOC105933590,LOC103360578 coding upstream 437645 9892351 ~ 9896258 (-)
b4gat1 b4gat1,LOC107747893,LOC107745213,LOC107692823,LOC107696735 coding upstream 452853 9907559 ~ 9911772 (-)
pfdn2 pfdn2,LOC107745204 coding upstream 459528 9914234 ~ 9919791 (-)
G61876 NA non-coding downstream 17683 9428794 ~ 9430832 (-)
G61518 NA non-coding downstream 135496 9312797 ~ 9313019 (-)
G61496 NA non-coding downstream 289400 9151418 ~ 9159115 (-)
G61492 LOC108267340 non-coding downstream 323207 9120761 ~ 9125308 (-)
LOC117597152 NA non-coding downstream 338550 9107528 ~ 9109965 (-)
LOC117597234 NA non-coding upstream 45013 9499719 ~ 9499931 (-)
LOC117597233 NA non-coding upstream 48356 9503062 ~ 9503274 (-)
LOC117597212 NA non-coding upstream 51738 9506444 ~ 9506654 (-)
LOC117597224 NA non-coding upstream 52329 9507035 ~ 9507242 (-)
LOC117597214 NA non-coding upstream 53372 9508078 ~ 9508282 (-)
G61537 NA other downstream 109770 9337826 ~ 9338745 (-)
LOC113540087 LOC108267275 other downstream 121084 9314849 ~ 9327431 (-)
G61478 NA other downstream 464062 8983234 ~ 8984453 (-)
LOC113526753 LOC108267287,LOC108261139 other downstream 852890 8571496 ~ 8595625 (-)
LOC113526822 LOC108268278 other downstream 896660 8452610 ~ 8551855 (-)
G61900 NA other upstream 151021 9605727 ~ 10041766 (-)
G61972 actn3,LOC106577856,LOC106608893 other upstream 321572 9776278 ~ 9805318 (-)
cxcl19 LOC108267987 other upstream 615700 10070406 ~ 10073229 (-)
LOC113540372 NA other upstream 623982 10078688 ~ 10080237 (-)
trnan-guu_9 NA other upstream 1031962 10486668 ~ 10486741 (-)

Expression


Co-expression Network