G63547


Basic Information

Item Value
gene id G63547
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 12801894 ~ 12834330 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU75285
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcgtgtgtgtattcactaACAAGCTAATAGCCTGCTCTCAAACTTGAAGTGTCTGAAACAGGCAGAGGTGCGATAAGGAATACATTTACAGGaaactacattttcaaaccAGACCTCACACTCCACCTGAGTTGCTGGTGCACTGGTGGTGGAGATTGTGCCAGTAGTTTTGAGATAGCAGGTGTAGTTCTGCAAGTTTGGGTATTtgacagaaggagagagtgagagagagaaccaaAAATAATCCCTGGCCCCAATATCCTGTTAAAACATTTGCATGTTCTGCCTGCCTATCGTGCACACTTTACCTGTGTAAGCTAGTTTAGCACATGGTTTAGATATATCGACCCTGATCTCATGAAAAATGAATCCACATTTAATTAGATAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75285 True 429 lncRNA 0.43 2 12801894 12834330

Neighbor

gene id symbol gene type direction distance location
wrap53 wrap53 coding upstream 13669 12777177 ~ 12788225 (+)
gigyf1a gigyf1 coding upstream 33990 12742257 ~ 12767904 (+)
epoa epo coding upstream 68416 12718253 ~ 12733478 (+)
LOC113540507 LOC108267598 coding upstream 85162 12712841 ~ 12716732 (+)
nlgn2a nlgn2,nlgn2a,LOC103033407,LOC107564776,LOC107753966,LOC107659731,LOC107750775,LOC107664280 coding upstream 131353 12508874 ~ 12670541 (+)
serpinh2 LOC108267141,LOC108412061 coding downstream 116739 12951069 ~ 12976437 (+)
dnah2 dnah2 coding downstream 146519 12980849 ~ 13115167 (+)
kdm6ba kdm6b,LOC106608825 coding downstream 281886 13116216 ~ 13198549 (+)
trip6 trip6,LOC103041331 coding downstream 398304 13232634 ~ 13242400 (+)
mettl3 mettl3,LOC107659734,LOC107595277 coding downstream 411655 13245985 ~ 13251814 (+)
LOC113540557 NA non-coding upstream 29072 12768585 ~ 12772822 (+)
G63242 NA non-coding upstream 443646 12357832 ~ 12358248 (+)
G63241 NA non-coding upstream 444213 12355550 ~ 12357681 (+)
G63137 si:dkey-165a24.9,LOC108267153,LOC108434867,LOC107572570,LOC107753961,LOC107659726,LOC107588125 non-coding upstream 552106 12248663 ~ 12249788 (+)
G63061 NA non-coding upstream 797671 12003990 ~ 12004223 (+)
LOC117596991 NA non-coding downstream 88540 12922870 ~ 12926987 (+)
G63685 NA non-coding downstream 285138 13119468 ~ 13119677 (+)
G63696 NA non-coding downstream 301329 13135659 ~ 13135860 (+)
G63666 NA non-coding downstream 364677 13199007 ~ 13199862 (+)
LOC117597082 NA non-coding downstream 424544 13258874 ~ 13267034 (+)
si:dkey-112a7.4 LOC108268066 other upstream 506761 12292491 ~ 12295133 (+)
si:ch211-200p22.4 LOC108267499,LOC108434851 other upstream 1096558 11644901 ~ 11705336 (+)
LOC117596972 LOC108267738,LOC108267932,LOC108267931,LOC108267739,LOC108267937,LOC108261673,LOC108267938,LOC108267933,LOC108267935,LOC108267740 other upstream 1196664 11590715 ~ 11605230 (+)
c4h4orf48 c7h4orf48 other upstream 2138483 10657357 ~ 10663411 (+)
trnak-cuu_19 NA other upstream 2306424 10495398 ~ 10495470 (+)
tmem88b tmem88,bcl6b,LOC108267673 other downstream 372327 13206657 ~ 13219859 (+)
slc16a13 slc16a13 other downstream 441132 13275462 ~ 13285834 (+)
G63903 NA other downstream 584047 13418377 ~ 13418696 (+)
LOC113539889 LOC108267838 other downstream 634222 13468552 ~ 13475037 (+)
cited1 cited1 other downstream 724293 13558623 ~ 13562266 (+)

Expression


Co-expression Network