G63685


Basic Information

Item Value
gene id G63685
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 13119468 ~ 13119677 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU75450
cacacacaaacacacacaccactcactgtgggaagagagagaaaacagaaatagGGCATCGGAAATAACTCACGGACAAGCCGCATCCAGCTCGTCCCTTTTAACTCGTCACCCAAATTACACCCTCCTGCTAAACCACGCCTCACCTACTGCAACATCACTCAGCTTTCCGGACCTGTGGCAGTAACCTGAGCTTGATCACACTATAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75450 True 210 lncRNA 0.50 1 13119468 13119677

Neighbor

gene id symbol gene type direction distance location
dnah2 dnah2 coding upstream 4301 12980849 ~ 13115167 (+)
serpinh2 LOC108267141,LOC108412061 coding upstream 143031 12951069 ~ 12976437 (+)
efnb3b efnb3,efnb3b,LOC107597046,LOC106577756 coding upstream 258251 12795941 ~ 12861217 (+)
wrap53 wrap53 coding upstream 331243 12777177 ~ 12788225 (+)
gigyf1a gigyf1 coding upstream 351564 12742257 ~ 12767904 (+)
trip6 trip6,LOC103041331 coding downstream 112957 13232634 ~ 13242400 (+)
mettl3 mettl3,LOC107659734,LOC107595277 coding downstream 126308 13245985 ~ 13251814 (+)
agfg2 LOC108267520,LOC108442826 coding downstream 192203 13311880 ~ 13327219 (+)
si:ch73-335l21.1 LOC108267519,LOC105020633 coding downstream 208356 13328033 ~ 13375050 (+)
si:ch73-335l21.2 LOC108268347,LOC108442822 coding downstream 272132 13391809 ~ 13394172 (+)
LOC117596991 NA non-coding upstream 192481 12922870 ~ 12926987 (+)
G63547 NA non-coding upstream 285138 12801894 ~ 12834330 (+)
LOC113540557 NA non-coding upstream 346646 12768585 ~ 12772822 (+)
G63242 NA non-coding upstream 761220 12357832 ~ 12358248 (+)
G63241 NA non-coding upstream 761787 12355550 ~ 12357681 (+)
G63696 NA non-coding downstream 15982 13135659 ~ 13135860 (+)
G63666 NA non-coding downstream 79330 13199007 ~ 13199862 (+)
LOC117597082 NA non-coding downstream 139197 13258874 ~ 13267034 (+)
G63889 NA non-coding downstream 267921 13387598 ~ 13387954 (+)
G63901 NA non-coding downstream 297544 13417221 ~ 13417441 (+)
si:dkey-112a7.4 LOC108268066 other upstream 824335 12292491 ~ 12295133 (+)
si:ch211-200p22.4 LOC108267499,LOC108434851 other upstream 1414132 11644901 ~ 11705336 (+)
LOC117596972 LOC108267738,LOC108267932,LOC108267931,LOC108267739,LOC108267937,LOC108261673,LOC108267938,LOC108267933,LOC108267935,LOC108267740 other upstream 1514238 11590715 ~ 11605230 (+)
c4h4orf48 c7h4orf48 other upstream 2456057 10657357 ~ 10663411 (+)
trnak-cuu_19 NA other upstream 2623998 10495398 ~ 10495470 (+)
tmem88b tmem88,bcl6b,LOC108267673 other downstream 86980 13206657 ~ 13219859 (+)
slc16a13 slc16a13 other downstream 155785 13275462 ~ 13285834 (+)
G63903 NA other downstream 298700 13418377 ~ 13418696 (+)
LOC113539889 LOC108267838 other downstream 348875 13468552 ~ 13475037 (+)
cited1 cited1 other downstream 438946 13558623 ~ 13562266 (+)

Expression


Co-expression Network