G63696


Basic Information

Item Value
gene id G63696
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 13135659 ~ 13135860 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU75461
AAGCACAATAGTAGAATATAGTAGTGTTATGGTTTTAACATAACACTACTATATTCTAGTTATCATGAAATACCAGAGCAAAATCAAAGTTTAATGAACGTAGTTACCATAAAGTACGTAAGTACAAACCTtcacaaaaaacttttttgagGAGTAAAGTAAGGAAGAGGTGCAGTGAGGGTGCTGGGATTTAGAGTACAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75461 True 202 lncRNA 0.34 1 13135659 13135860

Neighbor

gene id symbol gene type direction distance location
dnah2 dnah2 coding upstream 20492 12980849 ~ 13115167 (+)
serpinh2 LOC108267141,LOC108412061 coding upstream 159222 12951069 ~ 12976437 (+)
efnb3b efnb3,efnb3b,LOC107597046,LOC106577756 coding upstream 274442 12795941 ~ 12861217 (+)
wrap53 wrap53 coding upstream 347434 12777177 ~ 12788225 (+)
gigyf1a gigyf1 coding upstream 367755 12742257 ~ 12767904 (+)
trip6 trip6,LOC103041331 coding downstream 96774 13232634 ~ 13242400 (+)
mettl3 mettl3,LOC107659734,LOC107595277 coding downstream 110125 13245985 ~ 13251814 (+)
agfg2 LOC108267520,LOC108442826 coding downstream 176020 13311880 ~ 13327219 (+)
si:ch73-335l21.1 LOC108267519,LOC105020633 coding downstream 192173 13328033 ~ 13375050 (+)
si:ch73-335l21.2 LOC108268347,LOC108442822 coding downstream 255949 13391809 ~ 13394172 (+)
G63685 NA non-coding upstream 15982 13119468 ~ 13119677 (+)
LOC117596991 NA non-coding upstream 208672 12922870 ~ 12926987 (+)
G63547 NA non-coding upstream 301329 12801894 ~ 12834330 (+)
LOC113540557 NA non-coding upstream 362837 12768585 ~ 12772822 (+)
G63242 NA non-coding upstream 777411 12357832 ~ 12358248 (+)
G63666 NA non-coding downstream 63147 13199007 ~ 13199862 (+)
LOC117597082 NA non-coding downstream 123014 13258874 ~ 13267034 (+)
G63889 NA non-coding downstream 251738 13387598 ~ 13387954 (+)
G63901 NA non-coding downstream 281361 13417221 ~ 13417441 (+)
G63898 NA non-coding downstream 323502 13459362 ~ 13467726 (+)
si:dkey-112a7.4 LOC108268066 other upstream 840526 12292491 ~ 12295133 (+)
si:ch211-200p22.4 LOC108267499,LOC108434851 other upstream 1430323 11644901 ~ 11705336 (+)
LOC117596972 LOC108267738,LOC108267932,LOC108267931,LOC108267739,LOC108267937,LOC108261673,LOC108267938,LOC108267933,LOC108267935,LOC108267740 other upstream 1530429 11590715 ~ 11605230 (+)
c4h4orf48 c7h4orf48 other upstream 2472248 10657357 ~ 10663411 (+)
trnak-cuu_19 NA other upstream 2640189 10495398 ~ 10495470 (+)
tmem88b tmem88,bcl6b,LOC108267673 other downstream 70797 13206657 ~ 13219859 (+)
slc16a13 slc16a13 other downstream 139602 13275462 ~ 13285834 (+)
G63903 NA other downstream 282517 13418377 ~ 13418696 (+)
LOC113539889 LOC108267838 other downstream 332692 13468552 ~ 13475037 (+)
cited1 cited1 other downstream 422763 13558623 ~ 13562266 (+)

Expression


Co-expression Network