G64102


Basic Information

Item Value
gene id G64102
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 14012098 ~ 14012315 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU75933
TAGCAAGCTGGTTTTGTTATTACTTTACAATAAACACTGTGGGCCTGCAAGGCAATATGTTGTACCTTATTTGCCTGTTTACAACACTGAATCTCAAAACAAAAGTAGTACTAGTTCTAATCACAATTAATGTGAtacactataaaatatttaaattataacaCGCTGACTTACTAAAAATGTGTTGCATTGTTTTGGGGACTCCCCTAAAATTTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75933 True 218 lncRNA 0.33 1 14012098 14012315

Neighbor

gene id symbol gene type direction distance location
LOC113539767 t185a,tmem185a coding upstream 113593 13891113 ~ 13898505 (+)
ankrd46b ankrd46,ankrd46b,LOC108428588 coding upstream 122514 13882312 ~ 13889584 (+)
col4a6 col4a6,LOC108267418 coding upstream 131424 13798180 ~ 13880674 (+)
LOC113540276 LOC108267420 coding upstream 273188 13724314 ~ 13738910 (+)
rasl11a rasl11a,LOC108412587,LOC107596470,LOC106577879,LOC107707904,LOC107684967 coding upstream 312408 13692777 ~ 13699690 (+)
nagk nagk,LOC107697250 coding downstream 22892 14035207 ~ 14039607 (+)
hspa12b hspa12b,LOC107697252,LOC107721672,LOC107691462,LOC107744271,LOC107571934 coding downstream 52179 14064494 ~ 14080036 (+)
slc8a4b slc8a4b,LOC108267603,LOC108428577,LOC107721660,LOC107583282,LOC107661969 coding downstream 80179 14092494 ~ 14151289 (+)
ppp1r14bb ppp1r14b,ppp1r14bb,LOC108268202,LOC107583286,LOC107721662,LOC107661967 coding downstream 217658 14229973 ~ 14253890 (+)
LOC113540157 LOC108267639,LOC108428574,LOC101077706 coding downstream 343733 14356048 ~ 14379551 (+)
G64049 NA non-coding upstream 102639 13903441 ~ 13909459 (+)
G64025 NA non-coding upstream 252347 13755544 ~ 13759751 (+)
G63973 NA non-coding upstream 264026 13695649 ~ 13748072 (+)
G63976 NA non-coding upstream 439265 13570002 ~ 13572833 (+)
G63936 NA non-coding upstream 507379 13504460 ~ 13504719 (+)
G64103 NA non-coding downstream 904 14013219 ~ 14013418 (+)
G64105 NA non-coding downstream 4971 14017286 ~ 14017669 (+)
G64095 NA non-coding downstream 29653 14041968 ~ 14042414 (+)
G64308 NA non-coding downstream 44212 14056527 ~ 14056887 (+)
G64459 NA non-coding downstream 282687 14295002 ~ 14295261 (+)
gc2 LOC108267421,LOC108412585 other upstream 292644 13705417 ~ 13719454 (+)
cited1 cited1 other upstream 449832 13558623 ~ 13562266 (+)
LOC113539889 LOC108267838 other upstream 537061 13468552 ~ 13475037 (+)
G63903 NA other upstream 593402 13418377 ~ 13418696 (+)
slc16a13 slc16a13 other upstream 726264 13275462 ~ 13285834 (+)
brms1 brms1,LOC108268191,LOC108428539,LOC107661966,LOC107721670,LOC107661087,LOC105894187,LOC107583285 other downstream 243429 14255744 ~ 14269340 (+)
zgc:194930 LOC108268002 other downstream 619715 14632030 ~ 14658936 (+)
LOC113540079 sh3tc1 other downstream 2010879 16023194 ~ 16039984 (+)
LOC113539780 LOC108268335,LOC108434603,LOC107731925,LOC107595313,LOC793560,LOC107675495,LOC107683530,LOC107738035 other downstream 2297898 16310213 ~ 16319166 (+)
LOC113540582 cyb5d1,LOC108267266,LOC108434590,LOC107738084,LOC107683579,LOC106577649,LOC105907155,LOC107595290,LOC107707052,LOC107702060 other downstream 2355641 16367956 ~ 16370957 (+)

Expression


Co-expression Network