G64459


Basic Information

Item Value
gene id G64459
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 14295002 ~ 14295261 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU76367
aaaaaagggaatttTGCAGCATTAATTTCAGCTTATGGTAATTTTCTTAGCACCTAATAATGTAGAGTACATACCATACAATTTTCTAGCAAAATGATTCATTAAACATATTCTGTTTTAAGTGGGcaaattattgcattattattatcagcatCCTCATTATCATTAAGGTAATCTTAAAACCAGTTTGCCCCATATTGTGCTGGAGATTACACTGATCTGCAGgatatacattacatatataagGCCATTAGAAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76367 True 260 lncRNA 0.30 1 14295002 14295261

Neighbor

gene id symbol gene type direction distance location
ppp1r14bb ppp1r14b,ppp1r14bb,LOC108268202,LOC107583286,LOC107721662,LOC107661967 coding upstream 41112 14229973 ~ 14253890 (+)
slc8a4b slc8a4b,LOC108267603,LOC108428577,LOC107721660,LOC107583282,LOC107661969 coding upstream 143713 14092494 ~ 14151289 (+)
hspa12b hspa12b,LOC107697252,LOC107721672,LOC107691462,LOC107744271,LOC107571934 coding upstream 214966 14064494 ~ 14080036 (+)
nagk nagk,LOC107697250 coding upstream 255395 14035207 ~ 14039607 (+)
m1ap m1ap coding upstream 278877 13973996 ~ 14016125 (+)
LOC113540157 LOC108267639,LOC108428574,LOC101077706 coding downstream 60787 14356048 ~ 14379551 (+)
LOC113540153 nwd2,LOC107661962 coding downstream 281136 14576397 ~ 14622524 (+)
adam19a adam19a,LOC108267694,LOC108428568,LOC107708434 coding downstream 390993 14686254 ~ 14761565 (+)
paqr9 paqr9 coding downstream 528841 14824102 ~ 14829911 (+)
zmp:0000000660 arap2 coding downstream 594039 14889300 ~ 14968601 (+)
G64308 NA non-coding upstream 238115 14056527 ~ 14056887 (+)
G64095 NA non-coding upstream 252588 14041968 ~ 14042414 (+)
G64105 NA non-coding upstream 277333 14017286 ~ 14017669 (+)
G64103 NA non-coding upstream 281584 14013219 ~ 14013418 (+)
G64102 NA non-coding upstream 282687 14012098 ~ 14012315 (+)
G64462 NA non-coding downstream 1009 14296270 ~ 14296472 (+)
G64668 NA non-coding downstream 384945 14680206 ~ 14680813 (+)
G64673 NA non-coding downstream 467074 14762335 ~ 14762596 (+)
LOC117597182 NA non-coding downstream 682065 14977326 ~ 15011493 (+)
G64963 NA non-coding downstream 906048 15201309 ~ 15201528 (+)
brms1 brms1,LOC108268191,LOC108428539,LOC107661966,LOC107721670,LOC107661087,LOC105894187,LOC107583285 other upstream 25662 14255744 ~ 14269340 (+)
gc2 LOC108267421,LOC108412585 other upstream 575548 13705417 ~ 13719454 (+)
cited1 cited1 other upstream 732736 13558623 ~ 13562266 (+)
LOC113539889 LOC108267838 other upstream 819965 13468552 ~ 13475037 (+)
G63903 NA other upstream 876306 13418377 ~ 13418696 (+)
zgc:194930 LOC108268002 other downstream 336769 14632030 ~ 14658936 (+)
LOC113540079 sh3tc1 other downstream 1727933 16023194 ~ 16039984 (+)
LOC113539780 LOC108268335,LOC108434603,LOC107731925,LOC107595313,LOC793560,LOC107675495,LOC107683530,LOC107738035 other downstream 2014952 16310213 ~ 16319166 (+)
LOC113540582 cyb5d1,LOC108267266,LOC108434590,LOC107738084,LOC107683579,LOC106577649,LOC105907155,LOC107595290,LOC107707052,LOC107702060 other downstream 2072695 16367956 ~ 16370957 (+)
arrb2b arrb2,arrb2b,LOC108434652,LOC108267683,LOC105904870,LOC101076921,LOC107750580,LOC107593814,LOC107561939 other downstream 3040236 17335497 ~ 17401388 (+)

Expression


Co-expression Network