G64462


Basic Information

Item Value
gene id G64462
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 14296270 ~ 14296472 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU76370
CGAAATCAAGCCAATGAAAAAGTAGTGAGGACATGTCCCCAGCATTACCAGTGTAGGTTACGCCTATGTCTGTAGATCTCAAACAAGACAGCCGCTTTGATGCCTGTGCTTGATCATGAGTCAGAGTTAGAAGGCAGCACATCAACAGCTAGGAAGACCAGTATAAACAAGCAGTTTATAACACTTCTGCTAAAGCAGCCTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76370 True 203 lncRNA 0.44 1 14296270 14296472

Neighbor

gene id symbol gene type direction distance location
ppp1r14bb ppp1r14b,ppp1r14bb,LOC108268202,LOC107583286,LOC107721662,LOC107661967 coding upstream 42380 14229973 ~ 14253890 (+)
slc8a4b slc8a4b,LOC108267603,LOC108428577,LOC107721660,LOC107583282,LOC107661969 coding upstream 144981 14092494 ~ 14151289 (+)
hspa12b hspa12b,LOC107697252,LOC107721672,LOC107691462,LOC107744271,LOC107571934 coding upstream 216234 14064494 ~ 14080036 (+)
nagk nagk,LOC107697250 coding upstream 256663 14035207 ~ 14039607 (+)
m1ap m1ap coding upstream 280145 13973996 ~ 14016125 (+)
LOC113540157 LOC108267639,LOC108428574,LOC101077706 coding downstream 59576 14356048 ~ 14379551 (+)
LOC113540153 nwd2,LOC107661962 coding downstream 279925 14576397 ~ 14622524 (+)
adam19a adam19a,LOC108267694,LOC108428568,LOC107708434 coding downstream 389782 14686254 ~ 14761565 (+)
paqr9 paqr9 coding downstream 527630 14824102 ~ 14829911 (+)
zmp:0000000660 arap2 coding downstream 592828 14889300 ~ 14968601 (+)
G64459 NA non-coding upstream 1009 14295002 ~ 14295261 (+)
G64308 NA non-coding upstream 239383 14056527 ~ 14056887 (+)
G64095 NA non-coding upstream 253856 14041968 ~ 14042414 (+)
G64105 NA non-coding upstream 278601 14017286 ~ 14017669 (+)
G64103 NA non-coding upstream 282852 14013219 ~ 14013418 (+)
G64668 NA non-coding downstream 383734 14680206 ~ 14680813 (+)
G64673 NA non-coding downstream 465863 14762335 ~ 14762596 (+)
LOC117597182 NA non-coding downstream 680854 14977326 ~ 15011493 (+)
G64963 NA non-coding downstream 904837 15201309 ~ 15201528 (+)
LOC117597190 NA non-coding downstream 1209820 15506292 ~ 15556924 (+)
brms1 brms1,LOC108268191,LOC108428539,LOC107661966,LOC107721670,LOC107661087,LOC105894187,LOC107583285 other upstream 26930 14255744 ~ 14269340 (+)
gc2 LOC108267421,LOC108412585 other upstream 576816 13705417 ~ 13719454 (+)
cited1 cited1 other upstream 734004 13558623 ~ 13562266 (+)
LOC113539889 LOC108267838 other upstream 821233 13468552 ~ 13475037 (+)
G63903 NA other upstream 877574 13418377 ~ 13418696 (+)
zgc:194930 LOC108268002 other downstream 335558 14632030 ~ 14658936 (+)
LOC113540079 sh3tc1 other downstream 1726722 16023194 ~ 16039984 (+)
LOC113539780 LOC108268335,LOC108434603,LOC107731925,LOC107595313,LOC793560,LOC107675495,LOC107683530,LOC107738035 other downstream 2013741 16310213 ~ 16319166 (+)
LOC113540582 cyb5d1,LOC108267266,LOC108434590,LOC107738084,LOC107683579,LOC106577649,LOC105907155,LOC107595290,LOC107707052,LOC107702060 other downstream 2071484 16367956 ~ 16370957 (+)
arrb2b arrb2,arrb2b,LOC108434652,LOC108267683,LOC105904870,LOC101076921,LOC107750580,LOC107593814,LOC107561939 other downstream 3039025 17335497 ~ 17401388 (+)

Expression


Co-expression Network