Gene
RNA
| Item | Value |
|---|---|
| gene id | G65508 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 16451677 ~ 16451892 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU77566 | True | 216 | lncRNA | 0.40 | 1 | 16451677 | 16451892 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113540674 | LOC108268333 | coding | downstream | 1847 | 16441079 ~ 16449830 (-) |
| LOC113540241 | NA | coding | downstream | 12472 | 16431936 ~ 16439205 (-) |
| snx15 | snx15,LOC102775858 | coding | downstream | 108853 | 16336256 ~ 16342824 (-) |
| prox3 | LOC108267633 | coding | downstream | 118885 | 16327573 ~ 16332792 (-) |
| tmem179ba | t179b | coding | downstream | 125666 | 16321650 ~ 16326011 (-) |
| si:dkey-19b23.7 | si:dkey-19b23.7,LOC108434614,LOC107683551,LOC107597093 | coding | upstream | 13510 | 16465402 ~ 16470131 (-) |
| si:dkey-19b23.10 | LOC108268326 | coding | upstream | 30372 | 16482264 ~ 16495470 (-) |
| LOC113540033 | NA | coding | upstream | 47081 | 16498973 ~ 16504549 (-) |
| zgc:103586 | cda,zgc:103586,LOC108267558,LOC108434617,LOC105907191,LOC107597094,LOC107683547,LOC104927619 | coding | upstream | 55081 | 16506973 ~ 16514848 (-) |
| LOC117596996 | NA | coding | upstream | 76914 | 16528806 ~ 16535886 (-) |
| G65494 | NA | non-coding | downstream | 20159 | 16431136 ~ 16431518 (-) |
| G65493 | NA | non-coding | downstream | 22319 | 16429143 ~ 16429358 (-) |
| G65491 | NA | non-coding | downstream | 24270 | 16427201 ~ 16427407 (-) |
| G65472 | LOC108267266,LOC107595290,LOC107702060,LOC107707052,LOC107738084,LOC108434590,LOC105907155 | non-coding | downstream | 78530 | 16369532 ~ 16373147 (-) |
| G65475 | NA | non-coding | downstream | 83182 | 16368141 ~ 16368495 (-) |
| G65700 | NA | non-coding | upstream | 154115 | 16606007 ~ 16606592 (-) |
| G65715 | NA | non-coding | upstream | 223368 | 16675260 ~ 16684591 (-) |
| LOC117597072 | NA | non-coding | upstream | 276799 | 16728691 ~ 16735897 (-) |
| G65718 | NA | non-coding | upstream | 284261 | 16736153 ~ 16737913 (-) |
| G65722 | NA | non-coding | upstream | 351303 | 16803195 ~ 16804254 (-) |
| tnfsf12 | tnfsf12 | other | downstream | 25053 | 16419164 ~ 16426624 (-) |
| acox3 | acox3 | other | downstream | 379985 | 16054528 ~ 16071692 (-) |
| smim20 | NA | other | downstream | 459692 | 15973579 ~ 15991985 (-) |
| tbc1d19 | tbc1d19,LOC107660707 | other | downstream | 547322 | 15879471 ~ 15904355 (-) |
| G64436 | NA | other | downstream | 2207996 | 14232809 ~ 14243681 (-) |
| leap2 | LOC100304644 | other | upstream | 140670 | 16592562 ~ 16594505 (-) |
| bmp15 | LOC108267203 | other | upstream | 151917 | 16603809 ~ 16605717 (-) |
| G66053 | NA | other | upstream | 948702 | 17400594 ~ 17402464 (-) |
| rnaseka | LOC108267746 | other | upstream | 987585 | 17439477 ~ 17444188 (-) |
| G66281 | NA | other | upstream | 1141856 | 17593748 ~ 17634868 (-) |
