G65700


Basic Information

Item Value
gene id G65700
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 16606007 ~ 16606592 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU77804
AAAAGAGCTAGTGACCGCAAGCCTACTGAGGCATGGCCACATGGGTGGCACAGGGTGGCAGAGGCCATTAAAACAAGCCTTGTTACCACAACTCTGACCTAAAATCACATGTCTGAGAAGtcagttatttttattcagttcgTCCAGATTTAAGGAATCATGTATTGCTCATATTGACTCAAATCTGCATTGTAGTGTTGGTGGTATTTTGACTAAATCCATTCAGTAATAAGAACTATAAATCAACTGTGAAGCCAATACAGTAAAGACATTACAGTGATACCCTGCAAATGTAATTGTGTCTTAAACACTAGACCTGGACATGgcctatggaaaaaaaatatgtctagaattttaaaggttcttcaggttGTCTGACTGGATGATCAAGCCCTAGAAGTTCTATGCTGAACCCTACAAAAGAtgggtttcatttttatataaggTCCTCAATGGAAACTCTTAAAAAGCTACAATCATTAGCCAAAAAACAATcccactctcagaaaaaaaaggtattagcctgtacctttccttgtctctGGTGTGGTACCATCAAGAGCACCTCTTTTGTTGGAGTGTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77804 True 586 lncRNA 0.39 1 16606007 16606592

Neighbor

gene id symbol gene type direction distance location
phka1a phka1,phka1a,LOC108267555,LOC107707917,LOC107702224,LOC107711571 coding downstream 21474 16566064 ~ 16584533 (-)
LOC113539955 LOC108267556 coding downstream 41870 16552388 ~ 16564137 (-)
LOC117596996 NA coding downstream 70121 16528806 ~ 16535886 (-)
zgc:103586 cda,zgc:103586,LOC108267558,LOC108434617,LOC105907191,LOC107597094,LOC107683547,LOC104927619 coding downstream 91159 16506973 ~ 16514848 (-)
LOC113540033 NA coding downstream 101458 16498973 ~ 16504549 (-)
otub1b otub1,LOC106608596 coding upstream 42593 16649185 ~ 16653787 (-)
fam113 LOC108268071,LOC108434623,LOC107741458 coding upstream 49348 16655940 ~ 16661187 (-)
adad2 LOC108267669 coding upstream 56537 16663129 ~ 16669417 (-)
rcor2 rcor2,LOC107588183,LOC107668449,LOC107749809 coding upstream 108613 16715205 ~ 16726855 (-)
arl2 arl2,LOC107588185,LOC107668402 coding upstream 156274 16762866 ~ 16768038 (-)
G65508 NA non-coding downstream 154115 16451677 ~ 16451892 (-)
G65494 NA non-coding downstream 174489 16431136 ~ 16431518 (-)
G65493 NA non-coding downstream 176649 16429143 ~ 16429358 (-)
G65491 NA non-coding downstream 178600 16427201 ~ 16427407 (-)
G65472 LOC108267266,LOC107595290,LOC107702060,LOC107707052,LOC107738084,LOC108434590,LOC105907155 non-coding downstream 232860 16369532 ~ 16373147 (-)
G65715 NA non-coding upstream 68668 16675260 ~ 16684591 (-)
LOC117597072 NA non-coding upstream 122099 16728691 ~ 16735897 (-)
G65718 NA non-coding upstream 129561 16736153 ~ 16737913 (-)
G65722 NA non-coding upstream 196603 16803195 ~ 16804254 (-)
G65809 NA non-coding upstream 330621 16937213 ~ 16937420 (-)
bmp15 LOC108267203 other downstream 290 16603809 ~ 16605717 (-)
leap2 LOC100304644 other downstream 11502 16592562 ~ 16594505 (-)
tnfsf12 tnfsf12 other downstream 179383 16419164 ~ 16426624 (-)
acox3 acox3 other downstream 534315 16054528 ~ 16071692 (-)
smim20 NA other downstream 614022 15973579 ~ 15991985 (-)
G66053 NA other upstream 794002 17400594 ~ 17402464 (-)
rnaseka LOC108267746 other upstream 832885 17439477 ~ 17444188 (-)
G66281 NA other upstream 987156 17593748 ~ 17634868 (-)
map11 c7h7orf43,cunh7orf43,si:dkey-3k24.5,LOC107687048,LOC107594676,LOC107754664,LOC107561780,LOC105895567 other upstream 1185634 17792226 ~ 17839915 (-)
LOC113540242 adamtsl1 other upstream 2443558 19050150 ~ 19155221 (-)

Expression


Co-expression Network