G66263


Basic Information

Item Value
gene id G66263
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 18091588 ~ 18096583 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU78533
GGAAAAGGTTGATAGCTCATGGCATATTATAATTAATGCTCTACCATAAATGGCCTCCTCTGACTCATTGCTTATTGaagtgttttttaattatttattgtaatctGATACTGCAAACCATCAGATTGTCCTGATCATTCTGTTCACTCTCAGCATCACAGGAGTTGCACTTGGAGTGGGATTCGAGTCCCACCACTCAGAGTTTTGTGGAGAGACAAACGGGTTAAGAAGTCTCACAGATTATCACTGTTCTGCTGAAGATAATCAGCTCTACATGTCCTCCCCCAGAGGAGATCTCAATCGAACATCAACATTTCACCTTGCTTTACTGACATTTCAGCCTAGATGAAGGATCAGCTTAACCTTTTAAAGCCAAAGCTTCTTCAACTGAAAATAATTAGGTGAGCTTGCAGGGTTGCCCTGTTTAATATCAGTAAGATGAGCCTCTATCTGCTGGAATCTGTGAGAACTCGTCATCCAGGCACTCGTCATCTCATAACTTGACAAGTCTTACACTCTGTTGCCAACTTGTACTTGTACAattgggagggatggcattactgtctctcctgtcaatcagagcgacactagccaatcatgtatgcagaagagggcagttagaGCTATCATCTGactgtgttatgctgccctgtgatgcagaatgagcaacagtttgaaaagatgtagtGACTGGATTAACATATCTCTCAGGAAGCACACACTAGTCTTCACATTGCCTGGTTGGTAGCCGTCATGTGACAGGGGGGAGCTAGCGATAAGCAGCTGCACTAGCTTGAAGAGATTGTACTGTAAAAGgttGACTGTTTAAAAAGGATACTATGGAAATGTAAACATAGACTCACAAATTTGAGGAGGACGGTGTTCTCTCTCAGAGCTCCGATGCAACCAGCAAAACCCAGGAtaaacatcacaccacccaccACCAGAAACAGCCAGACAGGGTCAAACCCACCCAGATCAGTGATGGAGGAAATGTTTGAGAGCACGCCCTGATGCAGAAAGACAAAGTTAGACCCTATTCAGATGTAGTATTAAGATCTCATCAGTGCACAGCTGAGAAGGTCCACACCTCGTATATTCATGTGTCCTGAATGTATCCTCACTGACCACTTGGGATCACATTTCTTGACAAAAGTTTTTTCCAGAAAGTGCCAAAACACAATACTGGTTCAAAACAACAcagaatatatacatatttagcTGTTGCGCAGCATTTTCTAATTAAACTGTTGCGCACTTTTA

Function

NR:

description
PREDICTED: electrogenic sodium bicarbonate cotransporter 1-like isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78533 True 1263 lncRNA 0.43 2 18091588 18096583

Neighbor

gene id symbol gene type direction distance location
rap1gds1 rap1gds1,LOC107552992 coding upstream 9158 18049289 ~ 18082430 (+)
spata6l spata6l coding upstream 63537 18020211 ~ 18028051 (+)
gabarapb gabarap,gabarapb,LOC105911381,LOC106577557,LOC105008592 coding upstream 72509 18015129 ~ 18019079 (+)
elp5 elp5 coding upstream 93372 17992640 ~ 17998216 (+)
LOC113540162 LOC108268287 coding upstream 123277 17966324 ~ 17968311 (+)
sec24d sec24d,LOC103036498,LOC107732696 coding downstream 125041 18221624 ~ 18243797 (+)
gba3 LOC108267130,LOC108437095 coding downstream 329775 18426358 ~ 18430359 (+)
sod3a NA coding downstream 752582 18849165 ~ 18851580 (+)
ppp1r15a NA coding downstream 854464 18951047 ~ 18954000 (+)
LOC113540597 col25a1,LOC102793499 coding downstream 1074116 19170699 ~ 19327377 (+)
G66237 NA non-coding upstream 99341 17990435 ~ 17992247 (+)
G66186 NA non-coding upstream 116229 17973998 ~ 17975359 (+)
G66169 NA non-coding upstream 172491 17904611 ~ 17919097 (+)
G66214 LOC108268343 non-coding upstream 214514 17873399 ~ 17877074 (+)
G66179 NA non-coding upstream 316279 17772553 ~ 17775309 (+)
G66426 NA non-coding downstream 15102 18111685 ~ 18111915 (+)
G66452 NA non-coding downstream 80651 18177234 ~ 18177642 (+)
G66637 NA non-coding downstream 285373 18381956 ~ 18382162 (+)
G66654 NA non-coding downstream 333979 18430562 ~ 18431136 (+)
G66670 NA non-coding downstream 394789 18491372 ~ 18491581 (+)
ctdnep1b ctdnep1,ctdnep1b,ctdnep1a,LOC108413724,LOC107659132,LOC107679908,LOC107747382 other upstream 80626 18000158 ~ 18010962 (+)
LOC113539940 NA other upstream 471509 17609492 ~ 17620079 (+)
arrb2b arrb2,arrb2b,LOC108434652,LOC108267683,LOC105904870,LOC101076921,LOC107750580,LOC107593814,LOC107561939 other upstream 690200 17335497 ~ 17401388 (+)
LOC113540582 cyb5d1,LOC108267266,LOC108434590,LOC107738084,LOC107683579,LOC106577649,LOC105907155,LOC107595290,LOC107707052,LOC107702060 other upstream 1720631 16367956 ~ 16370957 (+)
LOC113539780 LOC108268335,LOC108434603,LOC107731925,LOC107595313,LOC793560,LOC107675495,LOC107683530,LOC107738035 other upstream 1772422 16310213 ~ 16319166 (+)
frem1a frem1 other downstream 16850 18113433 ~ 18143631 (+)
G66492 LOC108267609,LOC108437090 other downstream 100729 18197312 ~ 18208564 (+)
G66864 NA other downstream 759873 18856456 ~ 18858652 (+)
dock11 dock11,LOC107683516 other downstream 1894101 19990684 ~ 20067220 (+)
fcer1g LOC100305060 other downstream 2051212 20147795 ~ 20154777 (+)

Expression


Co-expression Network