Item | Value |
---|---|
gene id | G66452 |
gene name | NA |
gene type | non-coding |
species | striped catfish (Pangasianodon hypophthalmus) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 18177234 ~ 18177642 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU78810 | True | 301 | lncRNA | 0.48 | 2 | 18177234 | 18177642 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
rap1gds1 | rap1gds1,LOC107552992 | coding | upstream | 94804 | 18049289 ~ 18082430 (+) |
spata6l | spata6l | coding | upstream | 149183 | 18020211 ~ 18028051 (+) |
gabarapb | gabarap,gabarapb,LOC105911381,LOC106577557,LOC105008592 | coding | upstream | 158155 | 18015129 ~ 18019079 (+) |
elp5 | elp5 | coding | upstream | 179018 | 17992640 ~ 17998216 (+) |
LOC113540162 | LOC108268287 | coding | upstream | 208923 | 17966324 ~ 17968311 (+) |
sec24d | sec24d,LOC103036498,LOC107732696 | coding | downstream | 43982 | 18221624 ~ 18243797 (+) |
gba3 | LOC108267130,LOC108437095 | coding | downstream | 248716 | 18426358 ~ 18430359 (+) |
sod3a | NA | coding | downstream | 671523 | 18849165 ~ 18851580 (+) |
ppp1r15a | NA | coding | downstream | 773405 | 18951047 ~ 18954000 (+) |
LOC113540597 | col25a1,LOC102793499 | coding | downstream | 993057 | 19170699 ~ 19327377 (+) |
G66426 | NA | non-coding | upstream | 65319 | 18111685 ~ 18111915 (+) |
G66263 | NA | non-coding | upstream | 80651 | 18091588 ~ 18096583 (+) |
G66237 | NA | non-coding | upstream | 184987 | 17990435 ~ 17992247 (+) |
G66186 | NA | non-coding | upstream | 201875 | 17973998 ~ 17975359 (+) |
G66169 | NA | non-coding | upstream | 258137 | 17904611 ~ 17919097 (+) |
G66637 | NA | non-coding | downstream | 204314 | 18381956 ~ 18382162 (+) |
G66654 | NA | non-coding | downstream | 252920 | 18430562 ~ 18431136 (+) |
G66670 | NA | non-coding | downstream | 313730 | 18491372 ~ 18491581 (+) |
G66754 | NA | non-coding | downstream | 491400 | 18669042 ~ 18669250 (+) |
G66855 | NA | non-coding | downstream | 650537 | 18828179 ~ 18833827 (+) |
frem1a | frem1 | other | upstream | 33603 | 18113433 ~ 18143631 (+) |
ctdnep1b | ctdnep1,ctdnep1b,ctdnep1a,LOC108413724,LOC107659132,LOC107679908,LOC107747382 | other | upstream | 166272 | 18000158 ~ 18010962 (+) |
LOC113539940 | NA | other | upstream | 557155 | 17609492 ~ 17620079 (+) |
arrb2b | arrb2,arrb2b,LOC108434652,LOC108267683,LOC105904870,LOC101076921,LOC107750580,LOC107593814,LOC107561939 | other | upstream | 775846 | 17335497 ~ 17401388 (+) |
LOC113540582 | cyb5d1,LOC108267266,LOC108434590,LOC107738084,LOC107683579,LOC106577649,LOC105907155,LOC107595290,LOC107707052,LOC107702060 | other | upstream | 1806277 | 16367956 ~ 16370957 (+) |
G66492 | LOC108267609,LOC108437090 | other | downstream | 19670 | 18197312 ~ 18208564 (+) |
G66864 | NA | other | downstream | 678814 | 18856456 ~ 18858652 (+) |
dock11 | dock11,LOC107683516 | other | downstream | 1813042 | 19990684 ~ 20067220 (+) |
fcer1g | LOC100305060 | other | downstream | 1970153 | 20147795 ~ 20154777 (+) |
G68232 | LOC108267516 | other | downstream | 2842616 | 21020258 ~ 21033753 (+) |