G66637


Basic Information

Item Value
gene id G66637
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 18381956 ~ 18382162 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU79006
GCTCCCTGTTATGTTAGCTAATGtctgtattattaaaataattattataaataaatactgtctgtttactgtctgtgtggagtttctgtgcatacTCTTCCCTGTgcggatttcctctgggttctccggtttcctcccacctctcgaaacatgccagtagatggactgggaagcccagtgttcccaggattggCTGGTGACCCTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79006 True 207 lncRNA 0.45 1 18381956 18382162

Neighbor

gene id symbol gene type direction distance location
sec24d sec24d,LOC103036498,LOC107732696 coding upstream 138159 18221624 ~ 18243797 (+)
rap1gds1 rap1gds1,LOC107552992 coding upstream 299526 18049289 ~ 18082430 (+)
spata6l spata6l coding upstream 353905 18020211 ~ 18028051 (+)
gabarapb gabarap,gabarapb,LOC105911381,LOC106577557,LOC105008592 coding upstream 362877 18015129 ~ 18019079 (+)
elp5 elp5 coding upstream 383740 17992640 ~ 17998216 (+)
gba3 LOC108267130,LOC108437095 coding downstream 44196 18426358 ~ 18430359 (+)
sod3a NA coding downstream 467003 18849165 ~ 18851580 (+)
ppp1r15a NA coding downstream 568885 18951047 ~ 18954000 (+)
LOC113540597 col25a1,LOC102793499 coding downstream 788537 19170699 ~ 19327377 (+)
etnppl etnppl coding downstream 945869 19328031 ~ 19338707 (+)
G66452 NA non-coding upstream 204314 18177234 ~ 18177642 (+)
G66426 NA non-coding upstream 270041 18111685 ~ 18111915 (+)
G66263 NA non-coding upstream 285373 18091588 ~ 18096583 (+)
G66237 NA non-coding upstream 389709 17990435 ~ 17992247 (+)
G66186 NA non-coding upstream 406597 17973998 ~ 17975359 (+)
G66654 NA non-coding downstream 48400 18430562 ~ 18431136 (+)
G66670 NA non-coding downstream 109210 18491372 ~ 18491581 (+)
G66754 NA non-coding downstream 286880 18669042 ~ 18669250 (+)
G66855 NA non-coding downstream 446017 18828179 ~ 18833827 (+)
G66865 NA non-coding downstream 476880 18859042 ~ 18863417 (+)
G66492 LOC108267609,LOC108437090 other upstream 173392 18197312 ~ 18208564 (+)
frem1a frem1 other upstream 238325 18113433 ~ 18143631 (+)
ctdnep1b ctdnep1,ctdnep1b,ctdnep1a,LOC108413724,LOC107659132,LOC107679908,LOC107747382 other upstream 370994 18000158 ~ 18010962 (+)
LOC113539940 NA other upstream 761877 17609492 ~ 17620079 (+)
arrb2b arrb2,arrb2b,LOC108434652,LOC108267683,LOC105904870,LOC101076921,LOC107750580,LOC107593814,LOC107561939 other upstream 980568 17335497 ~ 17401388 (+)
G66864 NA other downstream 474294 18856456 ~ 18858652 (+)
dock11 dock11,LOC107683516 other downstream 1608522 19990684 ~ 20067220 (+)
fcer1g LOC100305060 other downstream 1765633 20147795 ~ 20154777 (+)
G68232 LOC108267516 other downstream 2638096 21020258 ~ 21033753 (+)
plag1 plag1,LOC107570635 other downstream 2932056 21314218 ~ 21323967 (+)

Expression


Co-expression Network