G66864


Basic Information

Item Value
gene id G66864
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 18856456 ~ 18858652 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU79253
CGGGTTTTGTGCATAATGGACCCACCATCAGTAGCCGCATGAAGATTAGGGTTGAGTTTATGTAGGTAGTTTAGGGTTGAGGTAGTTAGAGAGGCGCAccttattttgtttctttgtggTATAGTTTATGTAGTAATTTGATTGCTACTGTTTTTGCTGAGATTTCACGCACACGGTTAAAATGCCTACAGTAGAGGAATTTATAGCGTCTCCGTCGGAAGAATTATTGGATCTCTGCACAAAAGAGCGGCTTCTTTAAATAGCTGAACATTATGATATTGATGTCAGCAATGATATGCTTAAAGAACGACGAAAAGCTATTTTGAGAAGTAACTTAATTGAAAGAAATTTTGGCGGAAAGATCGTCTGTTTCATTACCTTTACTTTCTATGTCGACTTCAGATTTCACATTTGAGCAGCAAAGAGTTACTTACGATGCAAAGTGAACATAAAGTttaaactgaaggcagaaatgGATAGGGATTTAGCAGTGGAGAAAATCCGACAGGAGACAATGCAGGCTAGGTTCGATTTTGAACATGGACTTGAAACGGATAGAGAAGGTGCCGCAGCTGGGATAGGTGAGGATACATTCGAGCTGCACTCTGTGGATCTGGAGCTGGAGGCTGCGGAGAATCAGAGCTGCGACCTACAGGTGAAGCAGGCCCAGCTGCGACAGCGGAAAAGCTGGAATCGAAACAAACACTCCCACACCCCCGGACTGACGCTCACCTGTCCCAGGTTTCGTTCACTCCGGCGCCGGGGTACCACGGAGCCTGGATGCAGCAGCAGTGGAAGACATGAGCCAGGACCCAGGCAAGGACCTCTCCCCTCCGCCGCCACCCGCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79253 True 850 TUCP 0.46 3 18856456 18858652

Neighbor

gene id symbol gene type direction distance location
sod3a NA coding upstream 4876 18849165 ~ 18851580 (+)
gba3 LOC108267130,LOC108437095 coding upstream 426097 18426358 ~ 18430359 (+)
sec24d sec24d,LOC103036498,LOC107732696 coding upstream 612659 18221624 ~ 18243797 (+)
rap1gds1 rap1gds1,LOC107552992 coding upstream 774026 18049289 ~ 18082430 (+)
spata6l spata6l coding upstream 828405 18020211 ~ 18028051 (+)
ppp1r15a NA coding downstream 92395 18951047 ~ 18954000 (+)
LOC113540597 col25a1,LOC102793499 coding downstream 312047 19170699 ~ 19327377 (+)
etnppl etnppl coding downstream 469379 19328031 ~ 19338707 (+)
trmt44 trmt44,LOC107710993 coding downstream 495728 19354380 ~ 19372755 (+)
gpr78b gpr78,LOC108267410,LOC103025717,LOC107554869,LOC107397001 coding downstream 529953 19388605 ~ 19393118 (+)
G66855 NA non-coding upstream 22629 18828179 ~ 18833827 (+)
G66754 NA non-coding upstream 187206 18669042 ~ 18669250 (+)
G66670 NA non-coding upstream 364875 18491372 ~ 18491581 (+)
G66654 NA non-coding upstream 425320 18430562 ~ 18431136 (+)
G66637 NA non-coding upstream 474294 18381956 ~ 18382162 (+)
G66865 NA non-coding downstream 390 18859042 ~ 18863417 (+)
G66888 NA non-coding downstream 50994 18909646 ~ 18910488 (+)
G66887 NA non-coding downstream 52405 18911057 ~ 18911397 (+)
LOC113540244 NA non-coding downstream 262186 19120838 ~ 19122624 (+)
G67205 rpl34,LOC107573163,LOC107566275,LOC107681344 non-coding downstream 487192 19345844 ~ 19351904 (+)
G66492 LOC108267609,LOC108437090 other upstream 647892 18197312 ~ 18208564 (+)
frem1a frem1 other upstream 712825 18113433 ~ 18143631 (+)
ctdnep1b ctdnep1,ctdnep1b,ctdnep1a,LOC108413724,LOC107659132,LOC107679908,LOC107747382 other upstream 845494 18000158 ~ 18010962 (+)
LOC113539940 NA other upstream 1236377 17609492 ~ 17620079 (+)
arrb2b arrb2,arrb2b,LOC108434652,LOC108267683,LOC105904870,LOC101076921,LOC107750580,LOC107593814,LOC107561939 other upstream 1455068 17335497 ~ 17401388 (+)
dock11 dock11,LOC107683516 other downstream 1132032 19990684 ~ 20067220 (+)
fcer1g LOC100305060 other downstream 1289143 20147795 ~ 20154777 (+)
G68232 LOC108267516 other downstream 2161606 21020258 ~ 21033753 (+)
plag1 plag1,LOC107570635 other downstream 2455566 21314218 ~ 21323967 (+)
mettl4 mettl4 other downstream 2770424 21629076 ~ 21640157 (+)

Expression


Co-expression Network