G67719


Basic Information

Item Value
gene id G67719
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 20066063 ~ 20067059 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU80274
GCTGTTATTTTGTTCTCATTGAACAGGAGTCACGTTCAGATACAGTCCCATGAgttatataacagcagcacttAGATAAATAATCCAGTCTATGAGAGGATGTTGTTCCTGAATAGACTAGTAAATCCTGCTCAATGCAAACTGCTACACAGTGTAGCACTGGCAAAGGCGTCACGCTGCTGTGGACTCATCTCAAGAATTATTTCCCACAATGATAAAATCAGTGGAAACAATCAGCCTATTTGATTGCCAATTTAACATGACTTGTACTGATTACCAACAGGCAATGCatccaagattttttttcttggaccatacattttgttaaacatgaaaaagaaatcttaatttaaatttaaattaaaatcctgatttctgtaaagctgctttgtgacaatgtccattgttaaacgtgttatacaaataaaattgagtcGAATTGAATATCTTGAAACTATCCATATTAATGCTTCTCCTGGCTGTGAGTTTGAGAATTCAGACACAGTAGTCAAATTATTAGCATGTAATCATCCGTGCAGGTCCATTTGCTCACATGTAAGCACTTATATTTAAAACTCAGAAAATTAGAAACTGTTCATTGCTCCAACACAAGCTttggaataacacactctgaatAAAGCAGGTGTTCATAGTACATTTACTGTGTTGTTTGTCACCACTGTCAGTAAACACAGCGACAGTGGTGCTCTAATAATTAAGACTTCAATGCAAAGAGGAAAATATCAGAAAGATAGTGAGGACTTGAAGGTGTTAAATCTCAAAACCTCAATAAGGATTGTCAAGATGGTAGAGATTCTGAGCTAACAGGCACCAGGCATTATTGACTTATTAAtgcatcataataataataatacatatttttaaaaggaGTGATGCGTTAAAAGGAACATCAAGGCCACAAATGTAGCTTATTAAAATGAAGGTGTTTTATTACGTTCTTCAATATAGTTTAAAATTTCTTCCCCTTCGCCTGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80274 True 997 lncRNA 0.35 1 20066063 20067059

Neighbor

gene id symbol gene type direction distance location
amdhd1 amdhd1,LOC107683519,LOC107738078 coding downstream 108116 19953165 ~ 19957947 (-)
si:ch211-212k18.7 LOC108267884 coding downstream 147635 19911733 ~ 19918428 (-)
LOC113540446 NA coding downstream 155004 19901414 ~ 19911059 (-)
zdhhc21 zdhhc21,LOC107677703,LOC107691467,LOC107743939,LOC107739372 coding downstream 202012 19847582 ~ 19864051 (-)
LOC113540206 nfib coding downstream 230105 19748276 ~ 19835958 (-)
ndufs2 ndufs2,LOC107679282,LOC102781006 coding upstream 65700 20132759 ~ 20143530 (-)
LOC113540737 NA coding upstream 76725 20143784 ~ 20143889 (-)
focad focad,LOC101469292 coding upstream 98652 20165711 ~ 20223868 (-)
LOC117597004 NA coding upstream 346866 20413925 ~ 20419029 (-)
map4k2 map4k2,LOC108440821,LOC107660717,LOC107679285 coding upstream 358532 20425591 ~ 20444949 (-)
G67562 NA non-coding downstream 235313 19830550 ~ 19830750 (-)
G67535 NA non-coding downstream 241144 19769357 ~ 19824919 (-)
G67556 NA non-coding downstream 277515 19787961 ~ 19788548 (-)
G67527 NA non-coding downstream 409621 19605492 ~ 19656442 (-)
G67528 NA non-coding downstream 436114 19616448 ~ 19629949 (-)
G67757 kirrel,kirrela,LOC108440115 non-coding upstream 60567 20127626 ~ 20132037 (-)
G67891 NA non-coding upstream 230263 20297322 ~ 20327561 (-)
G68075 mta2,LOC107597904,LOC107660724,LOC107709145 non-coding upstream 492319 20559378 ~ 20566758 (-)
G68080 NA non-coding upstream 503340 20570399 ~ 20570930 (-)
G68106 NA non-coding upstream 563107 20630166 ~ 20631710 (-)
snrpf snrpf,LOC106609479,LOC107738052 other downstream 100212 19962582 ~ 19965851 (-)
LOC113539792 LOC108267751,LOC108440128 other downstream 122229 19919480 ~ 19943834 (-)
G67587 NA other downstream 177337 19888179 ~ 19888726 (-)
zgc:112271 bola2,LOC105907194,LOC108436240,LOC105020731,LOC107569065,LOC106511278 other downstream 184423 19879968 ~ 19881640 (-)
LOC113540242 adamtsl1 other downstream 910842 19050150 ~ 19155221 (-)
znf16l LOC108268318 other upstream 711479 20778538 ~ 20825520 (-)
chchd7 chchd7 other upstream 1237633 21304692 ~ 21313897 (-)
G68462 NA other upstream 1258987 21326046 ~ 21329250 (-)
LOC113539989 LOC108436138 other upstream 1287560 21354619 ~ 21371010 (-)
G68760 NA other upstream 1867467 21934526 ~ 21935169 (-)

Expression


Co-expression Network