fcer1g (LOC100305060)


Basic Information

Item Value
gene id fcer1g
gene name LOC100305060
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 20147795 ~ 20154777 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU80337
AACGGACACGCACAAACCACAACTTCCCCTCTCATGCCTCTCACTCTCTGCTGAAGTCAGTTTCCTGAAAGCTAGCTGTCCATCGCTGCAGTGTGGTTCTTTTTCTCTGTAAGGCCTAAGTTTCAGTTATGAAGAAGCCTGGGTTCAACCTGCTTTGTCTCCTTCCCCTTTCGATGACCATTGGCCAAGCTGCCGCTGTGGATGAAGCGGAAATCTGCTATGTCTTGGACGCCATTCTGTTCGTCTACGGACTTGTCCTAACTATCCTTTACTGCCGACTGAAGataATGCATGAACTTGCAAAAAAACAGTCTTCTGcaaagACGGGAGCATCAGAGGGAGTCTATGAAGGACTTTCACATCGTACTCAAGATACGTATGAGTCCATCAACTTGAAGAAGACCAAAGCATAAGACGGACATAGTGAACAAAAATAATCCGAATGCTTTATTTTCCTCTtcttaacattatttaattgtCTTATTCCTGTTGACTAATGTAGACCGATGTAAAATCTAAGCAACTTTCTTTTAATGGAATTGCACTGTAATGCTAGAAACAGATGTATATCTAATTTTACTAGCTTAATAATTATTGAAAATTCTTTAATGtctgcatatttttgaaaagtaTATATGTATTTGAAGAAAAGTAAACAACTTTATGAGGAAAGTAATGTTAGAAAGTAGCATCATAGAAAGTAATATTCAAGGCCATTGGGATTTTTgagaaattaacatttttgttctatgaacaaaatgtcatttatgcTGAAtaactgtacatttatataCTTAATGTCTCACTTCTCTCCCTTTTATATTCCATGTATACATACTTTTCAAAGTTTGTGGGCTAGCTTTGCGTAATTCCTAAATTGCTAAAACATTTGTCTACTTGTGCTGTTTCTCTTCTGCAAAGTTGTTTCATATGTCTCTGGCTGCTATAGCAACAGCAGTTCCTCCAACCACAGTGTTCGATTAACTTCCTGTTTTCTGATCGTGTTGGTTGTCTGACAGAAGTGGAGTATCAAAACTTAGAACAGAACTACAGCGCTGGTTATATAAGTAAATACTGATTTCTGTACTCTTGAGATAGAGATCATGGTAATGCAGTTTTGACATCAAGCACCAGAGAGCAGCATTTATGCACATTTGTCACTGCCTCAAGTTTCTCAAGTTTCTGACCTATGCTTGCGTGTCTCTGGGTTCtctgttatttataattttgtattcTATCTATAATTCTCTGGATTGCCCTTTTGGGctgttttttgtaattttttaaaaatcatttctttcAGTAAAACATCTACATATGCATCCAGGTTGCTGAGCCTGTTTGTTATAAGCCATTAATAAACATACCC
>XM_026935939.2
TCTCATGCCTCTCACTCTCTGCTGAAGTCAGTTTCCTGAAAGCTAGCTGTCCATCGCTGCAGTGTGGTTCTTTTTCTCTGTAAGGCCTAAGTTTCAGTTATGAAGAAGCCTGGGTTCAACCTGCTTTGTCTCCTTCCCCTTTCGATGACCATTGGCCAAGCTGCCGCTGTGGATGAAGCGGAAATCTGCTATGTCTTGGACGCCATTCTGTTCGTCTACGGACTTGTCCTAACTATCCTTTACTGCCGACTGAAGataATGCATGAACTTGCAAAAAAACAGTCTTCTGcaaagACGGGAGCATCAGAGGGAGTCTATGAAGGACTTTCACATCGTACTCAAGATACGTATGAGTCCATCAACTTGAAGAAGACCAAAGCATAAGACGGACATAGTGAACAAAAATAATCCGAATGCTTTATTTTCCTCTtcttaacattatttaattgtCTTATTCCTGTTGACTAATGTAGACCGATGTAAAATCTAAGCAACTTTCTTTTAATGGAATTGCACTGTAATGCTAGAAACAGATGTATATCTAATTTTACTAGCTTAATAATTATTGAAAATTCTTTAATGtctgcatatttttgaaaagtaTATATGTATTTGAAGAAAAGTAAACAACTTTATGAGGAAAGTAATGTTAGAAAGTAGCATCATAGAAAGTAATATTCAAGGCCATTGGGATTTTTgagaaattaacatttttgttctatgaacaaaatgtcatttatgcTGAAtaactgtacatttatataCTTAATGTCTCACTTCTCTCCCTTTTATATTCCATGTATACATACTTTTCAAAGTTTGTGGGCTAGCTTTGCGTAATTCCTAAATTGCTAAAACATTTGTCTACTTGTGCTGTTTCTCTTCTGCAAAGTTGTTTCATATGTCTCTGGCTGCTATAGCAACAGCAGTTCCTCCAACCACAGTGTTCGATTAACTTCCTGTTTTCTGATCGTGTTGGTTGTCTGACAGAAGTGGAGTATCAAAACTTAGAACAGAACTACAGCGCTGGTTATATAAGTAAATACTGATTTCTGTACTCTTGAGATAGAGATCATGGTAATGCAGTTTTGACATCAAGCACCAGAGAGCAGCATTTATGCACATTTGTCACTGCGGACATGTCTCCACCACTCAGTGTTGCATCCTGCACGTTCACTTGTGCATCACTATGGACTCAAGTTTCTCAAGTTTCTGACCTATGCTTGCGTGTCTCTGGGTTCtctgttatttataattttgtattcTATCTATAATTCTCTGGATTGCCCTTTTGGGctgttttttgtaattttttaaaaatcatttctttcAGTAAAACATCTACATATGCATCCAGGTTGCTGAGCCTGTTTGTTATAAGCCATTAATAAACATACCCATAATA

Function

NR:

description
high affinity immunoglobulin epsilon receptor subunit gamma-like isoform X1

GO: NA

KEGG:

id description
K07983 FCER1G; high affinity immunoglobulin epsilon receptor subunit gamma

RNA

RNA id representative length rna type GC content exon number start site end site
TU80337 False 1369 TUCP 0.37 6 20147795 20154771
XM_026935939.2 True 1405 mRNA 0.37 5 20147824 20154777

Neighbor

gene id symbol gene type direction distance location
kirrel1a kirrel,kirrela,LOC108440115,LOC107731894,LOC107558429,LOC107679226 coding upstream 18331 20102481 ~ 20129464 (+)
trnar-ucu_2 NA coding upstream 46697 20101025 ~ 20101098 (+)
LOC113539830 NA coding upstream 48718 20091887 ~ 20099077 (+)
LOC113540456 LOC108268101 coding upstream 60490 20081770 ~ 20087305 (+)
LOC113540455 NA coding upstream 72760 20069061 ~ 20075035 (+)
hacd4 hacd4 coding downstream 4535 20159312 ~ 20166249 (+)
mllt3 mllt3,LOC107683508 coding downstream 67111 20221888 ~ 20271231 (+)
c4h4orf54 LOC108268294 coding downstream 135020 20289797 ~ 20297146 (+)
trmt10a trmt10a,LOC107683564,LOC106608639 coding downstream 152353 20307130 ~ 20314066 (+)
nectin4a LOC108267696 coding downstream 163660 20318437 ~ 20332200 (+)
G67642 snrpf,LOC107738052,LOC107558408,LOC106609479 non-coding upstream 181907 19962599 ~ 19965888 (+)
G67595 NA non-coding upstream 230626 19916600 ~ 19917169 (+)
G67594 NA non-coding upstream 233392 19911739 ~ 19914403 (+)
G67582 NA non-coding upstream 259070 19888178 ~ 19888725 (+)
G67579 NA non-coding upstream 266056 19879978 ~ 19881739 (+)
G67827 NA non-coding downstream 95281 20250058 ~ 20275675 (+)
G67958 LOC108267586 non-coding downstream 325823 20480600 ~ 20481755 (+)
G68054 NA non-coding downstream 480571 20635348 ~ 20635565 (+)
G68070 NA non-coding downstream 537486 20692263 ~ 20693111 (+)
G68192 NA non-coding downstream 710101 20864878 ~ 20895955 (+)
dock11 dock11,LOC107683516 other upstream 80575 19990684 ~ 20067220 (+)
G66864 NA other upstream 1289143 18856456 ~ 18858652 (+)
G66492 LOC108267609,LOC108437090 other upstream 1939231 18197312 ~ 18208564 (+)
frem1a frem1 other upstream 2004164 18113433 ~ 18143631 (+)
ctdnep1b ctdnep1,ctdnep1b,ctdnep1a,LOC108413724,LOC107659132,LOC107679908,LOC107747382 other upstream 2136833 18000158 ~ 18010962 (+)
G68232 LOC108267516 other downstream 865481 21020258 ~ 21033753 (+)
plag1 plag1,LOC107570635 other downstream 1159441 21314218 ~ 21323967 (+)
mettl4 mettl4 other downstream 1474299 21629076 ~ 21640157 (+)
LOC113540377 NA other downstream 1597639 21752416 ~ 21762301 (+)
LOC113540463 NA other downstream 2495033 22649810 ~ 22652447 (+)

Expression


Co-expression Network