Item | Value |
---|---|
gene id | G68192 |
gene name | NA |
gene type | non-coding |
species | striped catfish (Pangasianodon hypophthalmus) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 20864878 ~ 20895955 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU80850 | True | 507 | lncRNA | 0.40 | 2 | 20864878 | 20895955 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC113540687 | LOC108267189 | coding | upstream | 17900 | 20843344 ~ 20846978 (+) |
cd248a | LOC108268330 | coding | upstream | 125704 | 20735827 ~ 20739174 (+) |
rce1a | rce1,rce1a,LOC107683501,LOC107731886,LOC107679240,LOC107710076 | coding | upstream | 172656 | 20682708 ~ 20692222 (+) |
rab1ba | rab1ba,LOC103373258,LOC107679256,LOC100695098,LOC108242295,LOC106532007 | coding | upstream | 204323 | 20652575 ~ 20660555 (+) |
si:ch73-40a2.1 | LOC108267785 | coding | upstream | 215692 | 20637228 ~ 20649186 (+) |
arsj | LOC108267195,LOC108436153,LOC107730122,LOC107698664,LOC559800,LOC107559837 | coding | downstream | 15695 | 20911650 ~ 20926058 (+) |
camk2d1 | LOC108267517,LOC108436151,LOC107732596 | coding | downstream | 39730 | 20935685 ~ 21012256 (+) |
ggh | LOC108267579 | coding | downstream | 293618 | 21189573 ~ 21194690 (+) |
penkb | LOC108267267 | coding | downstream | 387999 | 21283954 ~ 21287359 (+) |
sdr16c5b | sdr16c5,sdr16c5b,LOC107660835,LOC107570430,LOC107574325,LOC107711413,LOC107730129,LOC108436143 | coding | downstream | 402182 | 21298137 ~ 21303615 (+) |
G68070 | NA | non-coding | upstream | 171767 | 20692263 ~ 20693111 (+) |
G68054 | NA | non-coding | upstream | 229313 | 20635348 ~ 20635565 (+) |
G67958 | LOC108267586 | non-coding | upstream | 383123 | 20480600 ~ 20481755 (+) |
G67827 | NA | non-coding | upstream | 589203 | 20250058 ~ 20275675 (+) |
G67642 | snrpf,LOC107738052,LOC107558408,LOC106609479 | non-coding | upstream | 898990 | 19962599 ~ 19965888 (+) |
G68299 | NA | non-coding | downstream | 292576 | 21188531 ~ 21189134 (+) |
G68304 | NA | non-coding | downstream | 309790 | 21205745 ~ 21209324 (+) |
G68313 | NA | non-coding | downstream | 338070 | 21234025 ~ 21234258 (+) |
G68435 | NA | non-coding | downstream | 420300 | 21316255 ~ 21316515 (+) |
G68523 | NA | non-coding | downstream | 591019 | 21486974 ~ 21487488 (+) |
fcer1g | LOC100305060 | other | upstream | 710101 | 20147795 ~ 20154777 (+) |
dock11 | dock11,LOC107683516 | other | upstream | 797658 | 19990684 ~ 20067220 (+) |
G66864 | NA | other | upstream | 2006226 | 18856456 ~ 18858652 (+) |
G66492 | LOC108267609,LOC108437090 | other | upstream | 2656314 | 18197312 ~ 18208564 (+) |
frem1a | frem1 | other | upstream | 2721247 | 18113433 ~ 18143631 (+) |
G68232 | LOC108267516 | other | downstream | 124303 | 21020258 ~ 21033753 (+) |
plag1 | plag1,LOC107570635 | other | downstream | 418263 | 21314218 ~ 21323967 (+) |
mettl4 | mettl4 | other | downstream | 733121 | 21629076 ~ 21640157 (+) |
LOC113540377 | NA | other | downstream | 856461 | 21752416 ~ 21762301 (+) |
LOC113540463 | NA | other | downstream | 1753855 | 22649810 ~ 22652447 (+) |