Gene
RNA
| Item | Value |
|---|---|
| gene id | G69443 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 23284554 ~ 23284926 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU82369 | True | 373 | lncRNA | 0.31 | 1 | 23284554 | 23284926 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ackr4a | LOC108267630 | coding | upstream | 7753 | 23273523 ~ 23276801 (+) |
| si:ch211-106h4.6 | LOC108267631 | coding | upstream | 54101 | 23215075 ~ 23230453 (+) |
| si:ch211-106h4.4 | NA | coding | upstream | 70363 | 23181870 ~ 23214191 (+) |
| cacnb2b | cacnb2b,LOC108267179,LOC107713974,LOC107686054 | coding | upstream | 140468 | 23124180 ~ 23144086 (+) |
| si:dkey-32m20.1 | LOC108267269 | coding | upstream | 174851 | 23105623 ~ 23109703 (+) |
| rnf182 | rnf182 | coding | downstream | 60132 | 23345058 ~ 23349627 (+) |
| ranbp9 | ranbp9,LOC107556766,LOC107664064 | coding | downstream | 69043 | 23353969 ~ 23376185 (+) |
| epdr1 | LOC108267170,LOC107664036,LOC107558964,LOC108437243,LOC107713986 | coding | downstream | 102083 | 23387009 ~ 23391001 (+) |
| stard3nl | stard3nl,LOC107713985 | coding | downstream | 107732 | 23392658 ~ 23401730 (+) |
| otulinb | LOC108268091 | coding | downstream | 310035 | 23594961 ~ 23608201 (+) |
| G69294 | NA | non-coding | upstream | 280452 | 23001998 ~ 23004102 (+) |
| LOC113540593 | NA | non-coding | upstream | 345813 | 22926810 ~ 22938741 (+) |
| G68999 | NA | non-coding | upstream | 756998 | 22527328 ~ 22527556 (+) |
| G68954 | scrib | non-coding | upstream | 887453 | 22392839 ~ 22397101 (+) |
| G68955 | NA | non-coding | upstream | 896809 | 22383094 ~ 22387745 (+) |
| G69449 | NA | non-coding | downstream | 6484 | 23291410 ~ 23291998 (+) |
| G69514 | NA | non-coding | downstream | 46107 | 23331033 ~ 23331529 (+) |
| G69522 | NA | non-coding | downstream | 82735 | 23367661 ~ 23368677 (+) |
| G69570 | NA | non-coding | downstream | 162537 | 23447463 ~ 23457206 (+) |
| G69641 | NA | non-coding | downstream | 326027 | 23610953 ~ 23611157 (+) |
| LOC113540463 | NA | other | upstream | 632107 | 22649810 ~ 22652447 (+) |
| LOC113540377 | NA | other | upstream | 1522253 | 21752416 ~ 21762301 (+) |
| mettl4 | mettl4 | other | upstream | 1644397 | 21629076 ~ 21640157 (+) |
| plag1 | plag1,LOC107570635 | other | upstream | 1960587 | 21314218 ~ 21323967 (+) |
| G68232 | LOC108267516 | other | upstream | 2250801 | 21020258 ~ 21033753 (+) |
| G69509 | LOC108267411 | other | downstream | 33578 | 23318504 ~ 23320343 (+) |
| klhl18 | klhl18,LOC107657445,LOC107701005,LOC107733883,LOC107730797 | other | downstream | 743180 | 24028106 ~ 24106223 (+) |
| G69971 | NA | other | downstream | 823869 | 24108795 ~ 24109889 (+) |
| kif2c | kif2c | other | downstream | 1574100 | 24859026 ~ 24871263 (+) |
| tnr | tnr | other | downstream | 2422901 | 25707827 ~ 25881110 (+) |
