Gene
RNA
| Item | Value |
|---|---|
| gene id | G69514 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 23331033 ~ 23331529 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU82453 | True | 497 | lncRNA | 0.30 | 1 | 23331033 | 23331529 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ackr4a | LOC108267630 | coding | upstream | 54232 | 23273523 ~ 23276801 (+) |
| si:ch211-106h4.6 | LOC108267631 | coding | upstream | 100580 | 23215075 ~ 23230453 (+) |
| si:ch211-106h4.4 | NA | coding | upstream | 116842 | 23181870 ~ 23214191 (+) |
| cacnb2b | cacnb2b,LOC108267179,LOC107713974,LOC107686054 | coding | upstream | 186947 | 23124180 ~ 23144086 (+) |
| si:dkey-32m20.1 | LOC108267269 | coding | upstream | 221330 | 23105623 ~ 23109703 (+) |
| rnf182 | rnf182 | coding | downstream | 13529 | 23345058 ~ 23349627 (+) |
| ranbp9 | ranbp9,LOC107556766,LOC107664064 | coding | downstream | 22440 | 23353969 ~ 23376185 (+) |
| epdr1 | LOC108267170,LOC107664036,LOC107558964,LOC108437243,LOC107713986 | coding | downstream | 55480 | 23387009 ~ 23391001 (+) |
| stard3nl | stard3nl,LOC107713985 | coding | downstream | 61129 | 23392658 ~ 23401730 (+) |
| otulinb | LOC108268091 | coding | downstream | 263432 | 23594961 ~ 23608201 (+) |
| G69449 | NA | non-coding | upstream | 39035 | 23291410 ~ 23291998 (+) |
| G69443 | NA | non-coding | upstream | 46107 | 23284554 ~ 23284926 (+) |
| G69294 | NA | non-coding | upstream | 326931 | 23001998 ~ 23004102 (+) |
| LOC113540593 | NA | non-coding | upstream | 392292 | 22926810 ~ 22938741 (+) |
| G68999 | NA | non-coding | upstream | 803477 | 22527328 ~ 22527556 (+) |
| G69522 | NA | non-coding | downstream | 36132 | 23367661 ~ 23368677 (+) |
| G69570 | NA | non-coding | downstream | 115934 | 23447463 ~ 23457206 (+) |
| G69641 | NA | non-coding | downstream | 279424 | 23610953 ~ 23611157 (+) |
| LOC117597085 | NA | non-coding | downstream | 323393 | 23654922 ~ 23767863 (+) |
| G69722 | NA | non-coding | downstream | 426855 | 23758384 ~ 23774271 (+) |
| G69509 | LOC108267411 | other | upstream | 10690 | 23318504 ~ 23320343 (+) |
| LOC113540463 | NA | other | upstream | 678586 | 22649810 ~ 22652447 (+) |
| LOC113540377 | NA | other | upstream | 1568732 | 21752416 ~ 21762301 (+) |
| mettl4 | mettl4 | other | upstream | 1690876 | 21629076 ~ 21640157 (+) |
| plag1 | plag1,LOC107570635 | other | upstream | 2007066 | 21314218 ~ 21323967 (+) |
| klhl18 | klhl18,LOC107657445,LOC107701005,LOC107733883,LOC107730797 | other | downstream | 696577 | 24028106 ~ 24106223 (+) |
| G69971 | NA | other | downstream | 777266 | 24108795 ~ 24109889 (+) |
| kif2c | kif2c | other | downstream | 1527497 | 24859026 ~ 24871263 (+) |
| tnr | tnr | other | downstream | 2376298 | 25707827 ~ 25881110 (+) |
| LOC113539772 | kiaa0040 | other | downstream | 2565488 | 25897017 ~ 25902006 (+) |
