Gene
RNA
| Item | Value |
|---|---|
| gene id | G69522 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 23367661 ~ 23368677 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU82463 | True | 951 | lncRNA | 0.39 | 2 | 23367661 | 23368677 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rnf182 | rnf182 | coding | upstream | 18034 | 23345058 ~ 23349627 (+) |
| ackr4a | LOC108267630 | coding | upstream | 90860 | 23273523 ~ 23276801 (+) |
| si:ch211-106h4.6 | LOC108267631 | coding | upstream | 137208 | 23215075 ~ 23230453 (+) |
| si:ch211-106h4.4 | NA | coding | upstream | 153470 | 23181870 ~ 23214191 (+) |
| cacnb2b | cacnb2b,LOC108267179,LOC107713974,LOC107686054 | coding | upstream | 223575 | 23124180 ~ 23144086 (+) |
| epdr1 | LOC108267170,LOC107664036,LOC107558964,LOC108437243,LOC107713986 | coding | downstream | 18332 | 23387009 ~ 23391001 (+) |
| stard3nl | stard3nl,LOC107713985 | coding | downstream | 23981 | 23392658 ~ 23401730 (+) |
| otulinb | LOC108268091 | coding | downstream | 226284 | 23594961 ~ 23608201 (+) |
| ankhb | ankh,ankhb,LOC108437249,LOC107657429,LOC107713990 | coding | downstream | 245763 | 23614440 ~ 23641469 (+) |
| mycb | LOC108268289 | coding | downstream | 279594 | 23648271 ~ 23650633 (+) |
| G69514 | NA | non-coding | upstream | 36132 | 23331033 ~ 23331529 (+) |
| G69449 | NA | non-coding | upstream | 75663 | 23291410 ~ 23291998 (+) |
| G69443 | NA | non-coding | upstream | 82735 | 23284554 ~ 23284926 (+) |
| G69294 | NA | non-coding | upstream | 363559 | 23001998 ~ 23004102 (+) |
| LOC113540593 | NA | non-coding | upstream | 428920 | 22926810 ~ 22938741 (+) |
| G69570 | NA | non-coding | downstream | 78786 | 23447463 ~ 23457206 (+) |
| G69641 | NA | non-coding | downstream | 242276 | 23610953 ~ 23611157 (+) |
| LOC117597085 | NA | non-coding | downstream | 286245 | 23654922 ~ 23767863 (+) |
| G69722 | NA | non-coding | downstream | 389707 | 23758384 ~ 23774271 (+) |
| G69735 | NA | non-coding | downstream | 477968 | 23846645 ~ 23849514 (+) |
| G69509 | LOC108267411 | other | upstream | 47318 | 23318504 ~ 23320343 (+) |
| LOC113540463 | NA | other | upstream | 715214 | 22649810 ~ 22652447 (+) |
| LOC113540377 | NA | other | upstream | 1605360 | 21752416 ~ 21762301 (+) |
| mettl4 | mettl4 | other | upstream | 1727504 | 21629076 ~ 21640157 (+) |
| plag1 | plag1,LOC107570635 | other | upstream | 2043694 | 21314218 ~ 21323967 (+) |
| klhl18 | klhl18,LOC107657445,LOC107701005,LOC107733883,LOC107730797 | other | downstream | 659429 | 24028106 ~ 24106223 (+) |
| G69971 | NA | other | downstream | 740118 | 24108795 ~ 24109889 (+) |
| kif2c | kif2c | other | downstream | 1490349 | 24859026 ~ 24871263 (+) |
| tnr | tnr | other | downstream | 2339150 | 25707827 ~ 25881110 (+) |
| LOC113539772 | kiaa0040 | other | downstream | 2528340 | 25897017 ~ 25902006 (+) |
