G69966


Basic Information

Item Value
gene id G69966
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 24083606 ~ 24084218 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU83023
TCCTTTCTCTTCTGCCAGCGGCCACACGGGCTCTCCTCCAGGATCTCACTCTCATCCTCGCTCTCCTCTTCTTTTCCTCCAGACTCCGAGATCCTCTCCGGGACCGACATGGTCATTTTACGCGTTGAATtcctcctcctctggctGGCTCTGTCTACAGCCCGAGCTACGCACACGCGATTTGTGGCCAAACTGCCCTCCTGCTTCTGGAGCTACACTACACTGTTGATCATCATGACCACTGCAAATTGCAAAACGATGTCCGAGATATGCAAAGAAGAAAAGACGAAAAAATATGCACGGTGCAGAGTGCAGTTGGACGAGACAGACGGCAGATCCTGATCCAGATCCTGATCGCACGCAGAACAGCAAGcctatggtgtgtgtggtgtgtgtggtgtgtgaggaaAGCGCATATATTCCCTCGTtcccctcatcatcatcatcatggacGTGTGAGACGTGTGTGAGCTGCTGGCTATCAGATAACCTCCCCccctccaaaacacacacacactcccactttAACAGGCTACAAGCATGGTTTTGTCCCGTCAGCTCTTCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83023 True 567 lncRNA 0.52 2 24083606 24084218

Neighbor

gene id symbol gene type direction distance location
LOC113540619 NA coding upstream 59441 24021065 ~ 24024165 (+)
LOC113540051 NA coding upstream 66863 24013856 ~ 24016743 (+)
mycb LOC108268289 coding upstream 432973 23648271 ~ 23650633 (+)
ankhb ankh,ankhb,LOC108437249,LOC107657429,LOC107713990 coding upstream 442137 23614440 ~ 23641469 (+)
otulinb LOC108268091 coding upstream 475405 23594961 ~ 23608201 (+)
zgc:136930 LOC108267402,LOC107599883,LOC107733879,LOC108430265,LOC107657418,LOC107559002 coding downstream 37335 24121553 ~ 24127236 (+)
ccr9a LOC108267400 coding downstream 50458 24134676 ~ 24136808 (+)
LOC113540392 NA coding downstream 60864 24145082 ~ 24148968 (+)
si:dkey-154p10.3 LOC108267397,LOC107736657 coding downstream 77560 24161778 ~ 24170467 (+)
LOC113540614 NA coding downstream 86428 24170646 ~ 24174507 (+)
G69946 NA non-coding upstream 73746 24007703 ~ 24009860 (+)
G69878 abcf2,abcf2a,LOC107599875,LOC107657436,LOC107709809 non-coding upstream 140534 23940241 ~ 23943072 (+)
G69870 NA non-coding upstream 160910 23921800 ~ 23922696 (+)
G69736 NA non-coding upstream 226035 23855075 ~ 23857571 (+)
G69735 NA non-coding upstream 234092 23846645 ~ 23849514 (+)
G69987 NA non-coding downstream 54417 24138635 ~ 24138888 (+)
G70129 ccdc24 non-coding downstream 482027 24566245 ~ 24566613 (+)
G70130 NA non-coding downstream 482782 24567000 ~ 24567318 (+)
G70134 NA non-coding downstream 486430 24570648 ~ 24570850 (+)
G70138 NA non-coding downstream 490118 24574336 ~ 24574570 (+)
G69509 LOC108267411 other upstream 763263 23318504 ~ 23320343 (+)
LOC113540463 NA other upstream 1431159 22649810 ~ 22652447 (+)
LOC113540377 NA other upstream 2321305 21752416 ~ 21762301 (+)
mettl4 mettl4 other upstream 2443449 21629076 ~ 21640157 (+)
plag1 plag1,LOC107570635 other upstream 2759639 21314218 ~ 21323967 (+)
G69971 NA other downstream 24577 24108795 ~ 24109889 (+)
kif2c kif2c other downstream 774808 24859026 ~ 24871263 (+)
tnr tnr other downstream 1623609 25707827 ~ 25881110 (+)
LOC113539772 kiaa0040 other downstream 1812799 25897017 ~ 25902006 (+)
LOC117597118 LOC108261462,LOC108261092,LOC108261095 other downstream 2131846 26216064 ~ 26224038 (+)

Expression


Co-expression Network