G70780


Basic Information

Item Value
gene id G70780
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 25586253 ~ 25586458 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU83914
TTGGGCCAGGTGTTGCCAATGCTCTAGCCCCACCATCGGGTCACATTTGGGCTTAATTTGgatgtacatttatggtcataacttttgaaccacgTGTCAATGGCAACGTACCCTTTCACGTCAATTTCTGCCATCAGATTTTCcagattttaatcagattttccaccatcttggattttatCAAATCAGTTTTTCgttactcctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83914 True 206 lncRNA 0.42 1 25586253 25586458

Neighbor

gene id symbol gene type direction distance location
astn1 astn1 coding upstream 33414 25270222 ~ 25552839 (+)
dars2 dars2,LOC107658301,LOC104960769,LOC104948518 coding upstream 538936 25021613 ~ 25047317 (+)
klhl20 klhl20,LOC106569069 coding upstream 572947 24994877 ~ 25013306 (+)
kiss1ra kiss1ra,LOC108267265,LOC108411985,LOC107657423,LOC107599909 coding upstream 778849 24792295 ~ 24807404 (+)
zgc:113531 LOC108267389,LOC108430294,LOC106532842,LOC105940236,LOC107081705 coding upstream 989144 24587207 ~ 24597109 (+)
cop1 rfwd2,LOC107722073,LOC107726924 coding downstream 56944 25643402 ~ 25664410 (+)
mrps14 mrps14,LOC107678929,LOC107726917,LOC107559053,LOC107563590 coding downstream 364696 25951154 ~ 25953899 (+)
cacybp cacybp,LOC100304883 coding downstream 368498 25954956 ~ 25964158 (+)
plk3 plk3,LOC107726922,LOC107557223,LOC107722069,LOC107658359,LOC107678927 coding downstream 387423 25973881 ~ 25979456 (+)
rasal2 rasal2,LOC107678931 coding downstream 456465 26042923 ~ 26124146 (+)
G70778 NA non-coding upstream 719 25585326 ~ 25585534 (+)
G70763 LOC107732307 non-coding upstream 24907 25558427 ~ 25561346 (+)
G70695 NA non-coding upstream 28492 25556837 ~ 25557761 (+)
LOC117597084 NA non-coding upstream 255713 25328218 ~ 25330540 (+)
G70520 NA non-coding upstream 588028 24997916 ~ 24998225 (+)
G70782 NA non-coding downstream 3509 25589967 ~ 25590187 (+)
G70798 pappa2 non-coding downstream 26986 25613444 ~ 25613676 (+)
G70808 NA non-coding downstream 40255 25626713 ~ 25626937 (+)
G70813 NA non-coding downstream 66980 25653438 ~ 25690117 (+)
G71163 tnn non-coding downstream 337494 25923952 ~ 25928740 (+)
kif2c kif2c other upstream 714990 24859026 ~ 24871263 (+)
G69971 NA other upstream 1476364 24108795 ~ 24109889 (+)
klhl18 klhl18,LOC107657445,LOC107701005,LOC107733883,LOC107730797 other upstream 1480030 24028106 ~ 24106223 (+)
G69509 LOC108267411 other upstream 2265910 23318504 ~ 23320343 (+)
LOC113540463 NA other upstream 2933806 22649810 ~ 22652447 (+)
tnr tnr other downstream 121369 25707827 ~ 25881110 (+)
LOC113539772 kiaa0040 other downstream 310559 25897017 ~ 25902006 (+)
LOC117597118 LOC108261462,LOC108261092,LOC108261095 other downstream 629606 26216064 ~ 26224038 (+)
G71385 NA other downstream 642306 26228764 ~ 26229191 (+)
zgc:66427 zgc:66427,LOC108267510,LOC107738154,LOC101067737,LOC107100876,LOC103396713,LOC104950485,LOC107659393,LOC107668973,LOC107706368,LOC107557724,LOC107591360 other downstream 701832 26288290 ~ 26292784 (+)

Expression


Co-expression Network