G70808


Basic Information

Item Value
gene id G70808
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 25626713 ~ 25626937 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU83942
TTGACCTTCCCCTAGCTGTTCACATCTATCTTTACTTAAGTTGTGGACTGTATTCTAATTCCAGCTtgaatatatgtattttttccatttgttttgcACCATTCCGAATTCTTTCAAGCCTTTACTGTACTTCTaagctgtgtttcttttttcctagaTTTTGCAGTTCTTATTTTGTGGATATAAACTTGGATTTGCTTGTCAACAGAATCTGCCTGTGTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83942 True 225 lncRNA 0.34 1 25626713 25626937

Neighbor

gene id symbol gene type direction distance location
astn1 astn1 coding upstream 73874 25270222 ~ 25552839 (+)
dars2 dars2,LOC107658301,LOC104960769,LOC104948518 coding upstream 579396 25021613 ~ 25047317 (+)
klhl20 klhl20,LOC106569069 coding upstream 613407 24994877 ~ 25013306 (+)
kiss1ra kiss1ra,LOC108267265,LOC108411985,LOC107657423,LOC107599909 coding upstream 819309 24792295 ~ 24807404 (+)
zgc:113531 LOC108267389,LOC108430294,LOC106532842,LOC105940236,LOC107081705 coding upstream 1029604 24587207 ~ 24597109 (+)
cop1 rfwd2,LOC107722073,LOC107726924 coding downstream 16465 25643402 ~ 25664410 (+)
mrps14 mrps14,LOC107678929,LOC107726917,LOC107559053,LOC107563590 coding downstream 324217 25951154 ~ 25953899 (+)
cacybp cacybp,LOC100304883 coding downstream 328019 25954956 ~ 25964158 (+)
plk3 plk3,LOC107726922,LOC107557223,LOC107722069,LOC107658359,LOC107678927 coding downstream 346944 25973881 ~ 25979456 (+)
rasal2 rasal2,LOC107678931 coding downstream 415986 26042923 ~ 26124146 (+)
G70798 pappa2 non-coding upstream 13037 25613444 ~ 25613676 (+)
G70782 NA non-coding upstream 36526 25589967 ~ 25590187 (+)
G70780 NA non-coding upstream 40255 25586253 ~ 25586458 (+)
G70778 NA non-coding upstream 41179 25585326 ~ 25585534 (+)
G70763 LOC107732307 non-coding upstream 65367 25558427 ~ 25561346 (+)
G70813 NA non-coding downstream 26501 25653438 ~ 25690117 (+)
G71163 tnn non-coding downstream 297015 25923952 ~ 25928740 (+)
G71322 NA non-coding downstream 412245 26039182 ~ 26039383 (+)
G71329 NA non-coding downstream 501682 26128619 ~ 26128826 (+)
G71373 NA non-coding downstream 578621 26205558 ~ 26205786 (+)
kif2c kif2c other upstream 755450 24859026 ~ 24871263 (+)
G69971 NA other upstream 1516824 24108795 ~ 24109889 (+)
klhl18 klhl18,LOC107657445,LOC107701005,LOC107733883,LOC107730797 other upstream 1520490 24028106 ~ 24106223 (+)
G69509 LOC108267411 other upstream 2306370 23318504 ~ 23320343 (+)
LOC113540463 NA other upstream 2974266 22649810 ~ 22652447 (+)
tnr tnr other downstream 80890 25707827 ~ 25881110 (+)
LOC113539772 kiaa0040 other downstream 270080 25897017 ~ 25902006 (+)
LOC117597118 LOC108261462,LOC108261092,LOC108261095 other downstream 589127 26216064 ~ 26224038 (+)
G71385 NA other downstream 601827 26228764 ~ 26229191 (+)
zgc:66427 zgc:66427,LOC108267510,LOC107738154,LOC101067737,LOC107100876,LOC103396713,LOC104950485,LOC107659393,LOC107668973,LOC107706368,LOC107557724,LOC107591360 other downstream 661353 26288290 ~ 26292784 (+)

Expression


Co-expression Network