G71037


Basic Information

Item Value
gene id G71037
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 25610237 ~ 25610440 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU84189
TTGGAGTTCAGCCCAAAGAGTGGCTGCCATATGCCTTTTACACAGGAgtggcttccatctagccactcttccataaaaTCCTGATAGATGGAGTATTTATGAGATGGTTGTCCTTCTAGCAGGTACTCCCATCTCTTCTGAAGCTCTGttagagtgggcattgtgttcTTATTCACTTCCCTGACCAAAGCTCTTCTAGCCCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84189 True 204 lncRNA 0.47 1 25610237 25610440

Neighbor

gene id symbol gene type direction distance location
LOC117597083 NA coding downstream 185061 25423546 ~ 25425176 (-)
brinp2 brinp2,LOC107720848,LOC107700985,LOC107658350,LOC107562711,LOC107722070 coding downstream 354388 25139815 ~ 25255849 (-)
cenpl cenpl coding downstream 587821 25013206 ~ 25022416 (-)
eif2b3 eif2b3,LOC107722074,LOC107700990,LOC107599900,LOC107720854 coding downstream 646357 24919527 ~ 24963880 (-)
ptch2 ptch2,LOC107557169,LOC107700991,LOC107720855,LOC107599897,LOC107722076,LOC107657459 coding downstream 698447 24883746 ~ 24911790 (-)
tnn tnn coding upstream 294000 25904440 ~ 25932761 (-)
LOC117597050 LOC107716899,LOC107653439,LOC107548609 coding upstream 360194 25970634 ~ 25973005 (-)
parp2 parp2 coding upstream 708847 26319287 ~ 26329275 (-)
sdr39u1 sdr39u1 coding upstream 728295 26338735 ~ 26367975 (-)
si:dkeyp-66d1.7 LOC108267601,LOC103040076,LOC107706376,LOC107668989,LOC107738251,LOC107659403,LOC107557715,LOC107591450,LOC108413859 coding upstream 836018 26446458 ~ 26452831 (-)
G71013 NA non-coding downstream 38712 25571309 ~ 25571525 (-)
G70970 NA non-coding downstream 56008 25553077 ~ 25554229 (-)
G70906 astn1 non-coding downstream 165189 25409714 ~ 25445048 (-)
G70540 NA non-coding downstream 737404 24872630 ~ 24872833 (-)
G70044 NA non-coding downstream 1430373 24179031 ~ 24179864 (-)
LOC117597162 NA non-coding upstream 120953 25731393 ~ 25782894 (-)
LOC117597207 NA non-coding upstream 273688 25884128 ~ 25885257 (-)
G71298 NA non-coding upstream 293334 25903774 ~ 25904073 (-)
G71299 NA non-coding upstream 335771 25946211 ~ 25946576 (-)
G71313 NA non-coding upstream 392161 26002601 ~ 26002826 (-)
ccdc24 ccdc24 other downstream 1024189 24565741 ~ 24586048 (-)
G70255 rnf220 other downstream 1305311 24304374 ~ 24304926 (-)
LOC117597117 NA other downstream 2078221 23531238 ~ 23532016 (-)
LOC113540013 NA other downstream 2092567 23516930 ~ 23517670 (-)
LOC113540114 LOC108267227 other downstream 2093878 23515699 ~ 23516359 (-)
ltb4r2b NA other upstream 761481 26371921 ~ 26376408 (-)
G71596 NA other upstream 861640 26472080 ~ 26551030 (-)
G71832 NA other upstream 1486162 27096602 ~ 27100858 (-)
G71909 LOC108267490 other upstream 1593343 27203783 ~ 27204186 (-)
trnat-ugu_3 NA other upstream 1784917 27395357 ~ 27395429 (-)

Expression


Co-expression Network