Gene
RNA
| Item | Value |
|---|---|
| gene id | G71704 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 26689070 ~ 26690394 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU84990 | True | 699 | lncRNA | 0.46 | 2 | 26689070 | 26690394 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccnl1b | ccnl1 | coding | downstream | 10222 | 26672747 ~ 26678848 (-) |
| sppl2 | sppl2b | coding | downstream | 93080 | 26578794 ~ 26595990 (-) |
| si:dkeyp-66d1.7 | LOC108267601,LOC103040076,LOC107706376,LOC107668989,LOC107738251,LOC107659403,LOC107557715,LOC107591450,LOC108413859 | coding | downstream | 236239 | 26446458 ~ 26452831 (-) |
| sdr39u1 | sdr39u1 | coding | downstream | 321095 | 26338735 ~ 26367975 (-) |
| parp2 | parp2 | coding | downstream | 359795 | 26319287 ~ 26329275 (-) |
| slitrk3b | LOC108267197 | coding | upstream | 17688 | 26708082 ~ 26712304 (-) |
| copa | copa | coding | upstream | 80188 | 26770582 ~ 26786518 (-) |
| pex19 | pex19,LOC107591335,LOC107684402,LOC106569376 | coding | upstream | 96693 | 26787087 ~ 26790914 (-) |
| map1sb | LOC108267453 | coding | upstream | 101629 | 26792023 ~ 26805367 (-) |
| LOC113540659 | LOC108267452 | coding | upstream | 118262 | 26808656 ~ 26810250 (-) |
| G71700 | NA | non-coding | downstream | 17225 | 26671641 ~ 26671845 (-) |
| G71699 | NA | non-coding | downstream | 17534 | 26671260 ~ 26671536 (-) |
| G71698 | klhl6,LOC107591321,LOC107738218,LOC107684416 | non-coding | downstream | 17932 | 26670267 ~ 26671138 (-) |
| G71697 | NA | non-coding | downstream | 20512 | 26668295 ~ 26668558 (-) |
| G71696 | NA | non-coding | downstream | 21340 | 26667063 ~ 26667730 (-) |
| G71705 | NA | non-coding | upstream | 4552 | 26694946 ~ 26696321 (-) |
| G71707 | NA | non-coding | upstream | 6499 | 26696893 ~ 26697097 (-) |
| G71734 | NA | non-coding | upstream | 156952 | 26847346 ~ 26859455 (-) |
| G71732 | LOC108267445,LOC107591334,LOC107684401 | non-coding | upstream | 162873 | 26853267 ~ 26856672 (-) |
| G71764 | NA | non-coding | upstream | 204287 | 26894681 ~ 26895564 (-) |
| G71596 | NA | other | downstream | 138040 | 26472080 ~ 26551030 (-) |
| ltb4r2b | NA | other | downstream | 312662 | 26371921 ~ 26376408 (-) |
| ccdc24 | ccdc24 | other | downstream | 2103022 | 24565741 ~ 24586048 (-) |
| G70255 | rnf220 | other | downstream | 2384144 | 24304374 ~ 24304926 (-) |
| LOC117597117 | NA | other | downstream | 3157054 | 23531238 ~ 23532016 (-) |
| G71832 | NA | other | upstream | 406208 | 27096602 ~ 27100858 (-) |
| G71909 | LOC108267490 | other | upstream | 513389 | 27203783 ~ 27204186 (-) |
| trnat-ugu_3 | NA | other | upstream | 704963 | 27395357 ~ 27395429 (-) |
| trnat-ugu_4 | NA | other | upstream | 705757 | 27396151 ~ 27396223 (-) |
| LOC113540508 | LOC108268039 | other | upstream | 724873 | 27415267 ~ 27432678 (-) |
