G71707


Basic Information

Item Value
gene id G71707
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 26696893 ~ 26697097 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU84994
aagaagtgtaaaataaatcaataagtAAGTATGCAGGAGAAAGGAAGCTTCTCGTGCAGCTGTGTCTCACGCTCTGGTAAAGCAGCTAGTGCTAACCGATGAACTTTAAAGCCTGGTGAATTTCCTCACAGCTGCACTGGTGAGGGCTTCAAGAAAACTCGGAGAATATCGGTGTCAAAGCTCCAGGTTATATTTAAAATCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84994 True 205 lncRNA 0.42 1 26696893 26697097

Neighbor

gene id symbol gene type direction distance location
ccnl1b ccnl1 coding downstream 18045 26672747 ~ 26678848 (-)
sppl2 sppl2b coding downstream 100903 26578794 ~ 26595990 (-)
si:dkeyp-66d1.7 LOC108267601,LOC103040076,LOC107706376,LOC107668989,LOC107738251,LOC107659403,LOC107557715,LOC107591450,LOC108413859 coding downstream 244062 26446458 ~ 26452831 (-)
sdr39u1 sdr39u1 coding downstream 328918 26338735 ~ 26367975 (-)
parp2 parp2 coding downstream 367618 26319287 ~ 26329275 (-)
slitrk3b LOC108267197 coding upstream 10985 26708082 ~ 26712304 (-)
copa copa coding upstream 73485 26770582 ~ 26786518 (-)
pex19 pex19,LOC107591335,LOC107684402,LOC106569376 coding upstream 89990 26787087 ~ 26790914 (-)
map1sb LOC108267453 coding upstream 94926 26792023 ~ 26805367 (-)
LOC113540659 LOC108267452 coding upstream 111559 26808656 ~ 26810250 (-)
G71705 NA non-coding downstream 572 26694946 ~ 26696321 (-)
G71704 NA non-coding downstream 6499 26689070 ~ 26690394 (-)
G71700 NA non-coding downstream 25048 26671641 ~ 26671845 (-)
G71699 NA non-coding downstream 25357 26671260 ~ 26671536 (-)
G71698 klhl6,LOC107591321,LOC107738218,LOC107684416 non-coding downstream 25755 26670267 ~ 26671138 (-)
G71734 NA non-coding upstream 150249 26847346 ~ 26859455 (-)
G71732 LOC108267445,LOC107591334,LOC107684401 non-coding upstream 156170 26853267 ~ 26856672 (-)
G71764 NA non-coding upstream 197584 26894681 ~ 26895564 (-)
G71765 NA non-coding upstream 237893 26934990 ~ 26935197 (-)
G71815 NA non-coding upstream 334220 27031317 ~ 27036462 (-)
G71596 NA other downstream 145863 26472080 ~ 26551030 (-)
ltb4r2b NA other downstream 320485 26371921 ~ 26376408 (-)
ccdc24 ccdc24 other downstream 2110845 24565741 ~ 24586048 (-)
G70255 rnf220 other downstream 2391967 24304374 ~ 24304926 (-)
LOC117597117 NA other downstream 3164877 23531238 ~ 23532016 (-)
G71832 NA other upstream 399505 27096602 ~ 27100858 (-)
G71909 LOC108267490 other upstream 506686 27203783 ~ 27204186 (-)
trnat-ugu_3 NA other upstream 698260 27395357 ~ 27395429 (-)
trnat-ugu_4 NA other upstream 699054 27396151 ~ 27396223 (-)
LOC113540508 LOC108268039 other upstream 718170 27415267 ~ 27432678 (-)

Expression


Co-expression Network