G71832


Basic Information

Item Value
gene id G71832
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 27096602 ~ 27100858 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU85159
acacacacacatgcatgcacacacacgcacacacacacacaccaggacatcaactgtgaaggtgtgtgttctTCTATCGTCCATTTGATCCTACTGGAAAAATTAGATTCCTGATTCCTGCATTAAGGACTGACAAGAAATTTTACACAAGTATGAGTGAGATTGGTTCCTCAGAAACTCACAGCAACACCAAAGAGCTGATGGATGATGGGAAAAAAGccCCTGTGGAAAAGGTGTCTAAACCCCCAACTCAGGATGGTGAGGAAGAAATCGACATTGACCTGGAAGCGCCAGAGACGGAGAAAGCAGCTCTGGCCATTCAGAGTCAGTTCAGGCGtttccagaagaaaaaaaagtagataAGAAGCAGAAGAAAGGCAGGAAGGAAGAAGAATAAAGCTGCAATGCAGGAGGACAAGGAGTGTGTGGGTGGAAAATTAGGGGTCTCAGAATACCAAATAACAGTCTTTCACACTGACACAATGACAATTacagctcacacactctctttatctttttttttgtttctttctctctctctttcttgaaatAATTCCTGCAATAGTAATAATTT

Function

GO: NA

KEGG:

id description
ko04721 Synaptic vesicle cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU85159 True 574 TUCP 0.42 3 27096602 27100858

Neighbor

gene id symbol gene type direction distance location
LOC113540546 NA coding downstream 114393 26981189 ~ 26982209 (-)
prkci prkci,LOC107706387,LOC107668962,LOC107659412,LOC107738175,LOC107591345 coding downstream 163083 26917159 ~ 26933519 (-)
skila LOC108267442 coding downstream 183022 26903908 ~ 26913580 (-)
nadkb nadkb,LOC108267451,LOC107591341,LOC107738176,LOC108444346,LOC107659414,LOC107557499 coding downstream 207266 26881468 ~ 26889336 (-)
samd7 LOC108267443 coding downstream 251584 26835646 ~ 26845018 (-)
tmem125b LOC108267439 coding upstream 4636 27105494 ~ 27108411 (-)
cfap57 cfap57 coding upstream 7954 27108812 ~ 27143851 (-)
LOC113540028 NA coding upstream 52641 27153499 ~ 27158015 (-)
LOC113540236 LOC108267484 coding upstream 137086 27237944 ~ 27261901 (-)
LOC113539949 LOC108267483 coding upstream 186303 27287161 ~ 27310976 (-)
G71815 NA non-coding downstream 60140 27031317 ~ 27036462 (-)
G71765 NA non-coding downstream 161405 26934990 ~ 26935197 (-)
G71764 NA non-coding downstream 201038 26894681 ~ 26895564 (-)
G71734 NA non-coding downstream 237147 26847346 ~ 26859455 (-)
G71732 LOC108267445,LOC107591334,LOC107684401 non-coding downstream 239930 26853267 ~ 26856672 (-)
G71854 NA non-coding upstream 42248 27143106 ~ 27151314 (-)
G71892 NA non-coding upstream 73194 27174052 ~ 27174536 (-)
G71896 NA non-coding upstream 79076 27179934 ~ 27180140 (-)
G71903 NA non-coding upstream 90604 27191462 ~ 27191809 (-)
G71905 NA non-coding upstream 94632 27195490 ~ 27195813 (-)
G71596 NA other downstream 545572 26472080 ~ 26551030 (-)
ltb4r2b NA other downstream 720194 26371921 ~ 26376408 (-)
ccdc24 ccdc24 other downstream 2510554 24565741 ~ 24586048 (-)
G70255 rnf220 other downstream 2791676 24304374 ~ 24304926 (-)
LOC117597117 NA other downstream 3564586 23531238 ~ 23532016 (-)
G71909 LOC108267490 other upstream 102925 27203783 ~ 27204186 (-)
trnat-ugu_3 NA other upstream 294499 27395357 ~ 27395429 (-)
trnat-ugu_4 NA other upstream 295293 27396151 ~ 27396223 (-)
LOC113540508 LOC108268039 other upstream 314409 27415267 ~ 27432678 (-)
tsen15 tsen15 other upstream 373907 27474765 ~ 27483833 (-)

Expression


Co-expression Network