G73118


Basic Information

Item Value
gene id G73118
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 29629593 ~ 29629823 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU86683
atctgatacaagttagttcctgttatcgtgTACATTAtggcagctgtaaacagtcagtccctcatcagcctctctttttttcccactctccctcttgaagttaattatgcaaaacattgcagcttgttgtgttaaCTCTGTCGTGAATACTTTACCACGGCAGTAAACTGAATGACTGTTACAAGGTGTGACACTGGAGACCTGAGCCACGAATCTCCTTAAATTACCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86683 True 231 lncRNA 0.41 1 29629593 29629823

Neighbor

gene id symbol gene type direction distance location
LOC113540482 LOC108267690 coding upstream 26763 29596466 ~ 29602830 (+)
LOC113540073 NA coding upstream 70468 29554015 ~ 29559125 (+)
ccdc39 ccdc39 coding upstream 76046 29541983 ~ 29553547 (+)
dcun1d1 dcun1d1,LOC107568628,LOC107722250,LOC107681826,LOC105889496,LOC107708830,LOC103032878 coding upstream 89578 29534634 ~ 29540015 (+)
b3gnt5b b3gnt5 coding upstream 115814 29500475 ~ 29513779 (+)
rc3h1b LOC108267889,LOC108437509,LOC107681708 coding downstream 74665 29704488 ~ 29720768 (+)
LOC113539887 dbt,LOC108267843,LOC108411488 coding downstream 122248 29752071 ~ 29760972 (+)
rgs18 LOC108268317,LOC108428888 coding downstream 337848 29967671 ~ 29976291 (+)
rgs1 LOC108267137 coding downstream 356362 29986185 ~ 29989435 (+)
rgs13 LOC108268340 coding downstream 368681 29998504 ~ 30001345 (+)
G73092 NA non-coding upstream 88158 29541095 ~ 29541435 (+)
G73089 NA non-coding upstream 102675 29526202 ~ 29526918 (+)
G73088 NA non-coding upstream 104757 29524298 ~ 29524836 (+)
G73072 NA non-coding upstream 105351 29483262 ~ 29524242 (+)
G73069 eif4a2,LOC107708841,LOC107103884 non-coding upstream 108571 29519108 ~ 29521022 (+)
G73151 NA non-coding downstream 82647 29712470 ~ 29712682 (+)
G73154 NA non-coding downstream 88639 29718462 ~ 29719317 (+)
G73123 NA non-coding downstream 92243 29722066 ~ 29723750 (+)
G73155 NA non-coding downstream 102828 29732651 ~ 29733363 (+)
G73169 NA non-coding downstream 135297 29765120 ~ 29766106 (+)
asip2b NA other upstream 5796 29619993 ~ 29623797 (+)
fubp1 fubp1 other upstream 433444 29181767 ~ 29196149 (+)
G72873 NA other upstream 717489 28874356 ~ 28912104 (+)
selenot1a selenot,selt1a,LOC107681817,LOC107708642 other upstream 832434 28792847 ~ 28797159 (+)
gng5 NA other upstream 868142 28758545 ~ 28761451 (+)
zgc:153115 LOC108268059 other downstream 43691 29673514 ~ 29681175 (+)
uggt1 uggt1,LOC107748935,LOC107683622,LOC107727334 other downstream 824934 30454757 ~ 30478293 (+)
G73944 NA other downstream 1116308 30746131 ~ 30767132 (+)
spsb4a spsb4a,LOC108267127,LOC108440634,LOC103021520,LOC107706335,LOC107561810,LOC107694659,LOC107583109 other downstream 1431907 31061730 ~ 31097929 (+)
c4h22orf39 c7h22orf39 other downstream 1721378 31351201 ~ 31353144 (+)

Expression


Co-expression Network