G73123


Basic Information

Item Value
gene id G73123
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 29722066 ~ 29723750 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU86688
TCGAGCCGCGTAGCCGTGCAGAGACGGAGCGGACATTTTGTAAATGAAGTTTTGAGGGTTTCGTGTGTTTCTTGTGCTAGACAAGCATCCGCTTGCAAATAGTCGTCCTAGACGTGGAAAAAATCTCGCTAATCCAAATAATCGGCTTGCTTCCAGATGGAAAGGCAGCCTTCTTTGTCGTAATGGTCACTTTTTgcattatataaacattttgaggTTTTTGAAATGATGCTAATTTCTTTTGTCCTTGATTAAGGTCCACTTATGCTGTTCGCACAGTCGAAAACTTTGCCGCAGTCCAAGAATTGCTCGTGTGTTGTACATCCACAcaggtgccaacattgctagCAAGAGAATCTAAGCAGGCAGGAAGAACAAACTGAATTTGCAGGAAGTGAAATTAACTGCTGAACGCATGTCTTTTACATCCgacgtcctttccccttctgtGATTTGCCTTTTCCACCGATGTTTGGTTTGAGCAGAAGTTTTCAGCTGTCTCCCATATCGCTGTAACAAAGggtcaaaaatatttaaaaatatatactgctTGAGTgaagcaacagaaaagcatttgccgTATCGTTGCGAAGCGCAAGTCCGTATCTCATCAGTTATGCActgagtccaagagagcaaaactgggcGTGAGTAACGGTGTTACGGACAACCGCAGTGACGTTAGCCAATCGTGAGCTGGTTTAAGCtcctgtatgtggaagagggcagatagcgcaaACTTCCAGGCTGGTGGCCGTCGTGTTACAGAACTAGcgagtgggtgggaattggcaaaaatgatcaaattaggAGAAAATTGTGGATTTCACTCAAGCTGTAGACGTTGGCACCTCTGAATCCAGAATAGCTACAAACCTCCGAAATGTCGTGACAGTTTTTCTGGTCACAAACACTGAGCCTGTCAAAATTCATTTCATGTTCAAAGTCCAACCAAAATGTTCTGGAAGGACAAACCTTTGAAGAAAAGCCTATAGCTGATTAAAAAAGAATCAATCTTGGATTTATAAGCTTTAGCGGTTAAAACATGCTAGTATTTAAATAAGCAGACTGAATCCTTCTGAGTGGATGTTTAGAAAGACacacaggattttaaaaatttctgAGTTTTCTTCGTTGTTTGGTGACCAATCAAAGCAAAGCCAGCTCTATCGACAAACTCCTTCAAGCTAACGTTGGCTAACTGTGCAGGAGAGATGATGGATGTCTGTAGACAAGATGGATGAGAAATAGGAAACTAGCATCTTGTAATCTTTAGCGTAAAATAATCGTTGAAGAAATTTactgaaaagaaatgtatgaaaataatcctAGGTCACATCACGTACCTGCCTCCTGGGTTGTCGTCTTTTTGATTTGTCGCCTGATTGAACAAACatGAGGGGCGCATAGCTAGATAGCTAGGATGCTaattttatttagattatttgGGAACGTGCGAT

Function

NR:

description
PREDICTED: phosphatase and actin regulator 4 isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86688 True 1460 lncRNA 0.42 2 29722066 29723750

Neighbor

gene id symbol gene type direction distance location
rc3h1b LOC108267889,LOC108437509,LOC107681708 coding upstream 1298 29704488 ~ 29720768 (+)
LOC113540482 LOC108267690 coding upstream 119236 29596466 ~ 29602830 (+)
LOC113540073 NA coding upstream 162941 29554015 ~ 29559125 (+)
ccdc39 ccdc39 coding upstream 168519 29541983 ~ 29553547 (+)
dcun1d1 dcun1d1,LOC107568628,LOC107722250,LOC107681826,LOC105889496,LOC107708830,LOC103032878 coding upstream 182051 29534634 ~ 29540015 (+)
LOC113539887 dbt,LOC108267843,LOC108411488 coding downstream 28321 29752071 ~ 29760972 (+)
rgs18 LOC108268317,LOC108428888 coding downstream 243921 29967671 ~ 29976291 (+)
rgs1 LOC108267137 coding downstream 262435 29986185 ~ 29989435 (+)
rgs13 LOC108268340 coding downstream 274754 29998504 ~ 30001345 (+)
blvra blvra coding downstream 290905 30014655 ~ 30022571 (+)
G73154 NA non-coding upstream 2749 29718462 ~ 29719317 (+)
G73151 NA non-coding upstream 9384 29712470 ~ 29712682 (+)
G73118 NA non-coding upstream 92243 29629593 ~ 29629823 (+)
G73092 NA non-coding upstream 180631 29541095 ~ 29541435 (+)
G73089 NA non-coding upstream 195148 29526202 ~ 29526918 (+)
G73155 NA non-coding downstream 8901 29732651 ~ 29733363 (+)
G73169 NA non-coding downstream 41370 29765120 ~ 29766106 (+)
G73185 NA non-coding downstream 68766 29792516 ~ 29794205 (+)
G73512 NA non-coding downstream 206188 29929938 ~ 29930168 (+)
G73533 NA non-coding downstream 308560 30032310 ~ 30032788 (+)
zgc:153115 LOC108268059 other upstream 40891 29673514 ~ 29681175 (+)
asip2b NA other upstream 98269 29619993 ~ 29623797 (+)
fubp1 fubp1 other upstream 525917 29181767 ~ 29196149 (+)
G72873 NA other upstream 809962 28874356 ~ 28912104 (+)
selenot1a selenot,selt1a,LOC107681817,LOC107708642 other upstream 924907 28792847 ~ 28797159 (+)
uggt1 uggt1,LOC107748935,LOC107683622,LOC107727334 other downstream 731007 30454757 ~ 30478293 (+)
G73944 NA other downstream 1022381 30746131 ~ 30767132 (+)
spsb4a spsb4a,LOC108267127,LOC108440634,LOC103021520,LOC107706335,LOC107561810,LOC107694659,LOC107583109 other downstream 1337980 31061730 ~ 31097929 (+)
c4h22orf39 c7h22orf39 other downstream 1627451 31351201 ~ 31353144 (+)
LOC113540067 NA other downstream 2036139 31759889 ~ 31776798 (+)

Expression


Co-expression Network