G73533


Basic Information

Item Value
gene id G73533
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 30032310 ~ 30032788 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU87134
ATTAAGTCAGTAGATAAGTAAGTCATTAATCAGGAATTCAGTTAGTAAGTCATTACGTCAGAAAGTCAGTGAGTACTCAgtcagtactcagtcagtaaatcagtaataagtcagtaagtcagtagGTAAGTAAGTCATTAATCAGTAAGTCAGTTAGTAAGTCATTATGTCAGAAAGTCAGTCAGTAAATCAGTAataagtcagtc

Function

GO:

id name namespace
GO:0008144 drug binding molecular_function
GO:0019825 oxygen binding molecular_function
GO:0036094 small molecule binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87134 True 206 lncRNA 0.33 2 30032310 30032788

Neighbor

gene id symbol gene type direction distance location
blvra blvra coding upstream 9739 30014655 ~ 30022571 (+)
rgs13 LOC108268340 coding upstream 30965 29998504 ~ 30001345 (+)
rgs1 LOC108267137 coding upstream 42875 29986185 ~ 29989435 (+)
rgs18 LOC108268317,LOC108428888 coding upstream 56019 29967671 ~ 29976291 (+)
LOC113539887 dbt,LOC108267843,LOC108411488 coding upstream 271338 29752071 ~ 29760972 (+)
ebi3 LOC108267125 coding downstream 13107 30045895 ~ 30050490 (+)
keap1a keap1a,LOC108268010,LOC108428896,LOC107721712,LOC107690048,LOC107588875,LOC107749088 coding downstream 64917 30097705 ~ 30109835 (+)
zgc:110158 zgc:110158,LOC108267812,LOC108428898,LOC107678694,LOC105906991,LOC107690032 coding downstream 106215 30139003 ~ 30194574 (+)
znf622 znf622,LOC107721690 coding downstream 166906 30199694 ~ 30204010 (+)
d2hgdh d2hgdh coding downstream 172410 30205198 ~ 30211975 (+)
G73512 NA non-coding upstream 102142 29929938 ~ 29930168 (+)
G73185 NA non-coding upstream 238105 29792516 ~ 29794205 (+)
G73169 NA non-coding upstream 266204 29765120 ~ 29766106 (+)
G73155 NA non-coding upstream 298947 29732651 ~ 29733363 (+)
G73123 NA non-coding upstream 308560 29722066 ~ 29723750 (+)
G73564 NA non-coding downstream 51650 30084438 ~ 30084819 (+)
G73545 NA non-coding downstream 77824 30110612 ~ 30111156 (+)
G73567 NA non-coding downstream 79601 30112389 ~ 30112630 (+)
G73568 NA non-coding downstream 85218 30118006 ~ 30118492 (+)
G73571 NA non-coding downstream 90235 30123023 ~ 30123250 (+)
zgc:153115 LOC108268059 other upstream 351135 29673514 ~ 29681175 (+)
asip2b NA other upstream 408513 29619993 ~ 29623797 (+)
fubp1 fubp1 other upstream 836161 29181767 ~ 29196149 (+)
G72873 NA other upstream 1120206 28874356 ~ 28912104 (+)
selenot1a selenot,selt1a,LOC107681817,LOC107708642 other upstream 1235151 28792847 ~ 28797159 (+)
uggt1 uggt1,LOC107748935,LOC107683622,LOC107727334 other downstream 421969 30454757 ~ 30478293 (+)
G73944 NA other downstream 713343 30746131 ~ 30767132 (+)
spsb4a spsb4a,LOC108267127,LOC108440634,LOC103021520,LOC107706335,LOC107561810,LOC107694659,LOC107583109 other downstream 1028942 31061730 ~ 31097929 (+)
c4h22orf39 c7h22orf39 other downstream 1318413 31351201 ~ 31353144 (+)
LOC113540067 NA other downstream 1727101 31759889 ~ 31776798 (+)

Expression


Co-expression Network