G73564


Basic Information

Item Value
gene id G73564
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 30084438 ~ 30084819 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU87172
GCGCAGTGTGCGCCGGGAGCGCGCAGCATGAAAAACAATAAGACGATCATGTCCCGGGACGCGCTTCTTCTCCGCGTGATCATTCCCAGGAATTCTGGAATCTTTACCGCGCGACAGGGAATATTCCTCCTGGGAATACTGGAGAGCTTGGGGAGCTTGTACAAGatcttcttccctctctctctttctctctctctctgtctcttaagTTAAgtcccccaaaaaaaaaaaaaaaaaaaagaaagaaagaaagggaggagGAAAGCCAGCCTATCCAGCGTGCTTTGACGCGACACGATGGCTCGCTCGTGCTCCTTCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87172 True 320 lncRNA 0.50 2 30084438 30084819

Neighbor

gene id symbol gene type direction distance location
ebi3 LOC108267125 coding upstream 33948 30045895 ~ 30050490 (+)
blvra blvra coding upstream 61867 30014655 ~ 30022571 (+)
rgs13 LOC108268340 coding upstream 83093 29998504 ~ 30001345 (+)
rgs1 LOC108267137 coding upstream 95003 29986185 ~ 29989435 (+)
rgs18 LOC108268317,LOC108428888 coding upstream 108147 29967671 ~ 29976291 (+)
keap1a keap1a,LOC108268010,LOC108428896,LOC107721712,LOC107690048,LOC107588875,LOC107749088 coding downstream 12886 30097705 ~ 30109835 (+)
zgc:110158 zgc:110158,LOC108267812,LOC108428898,LOC107678694,LOC105906991,LOC107690032 coding downstream 54184 30139003 ~ 30194574 (+)
znf622 znf622,LOC107721690 coding downstream 114875 30199694 ~ 30204010 (+)
d2hgdh d2hgdh coding downstream 120379 30205198 ~ 30211975 (+)
otomp otomp,LOC108267868,LOC108428860,LOC107602611,LOC107690301 coding downstream 140224 30225043 ~ 30237040 (+)
G73533 NA non-coding upstream 51650 30032310 ~ 30032788 (+)
G73512 NA non-coding upstream 154270 29929938 ~ 29930168 (+)
G73185 NA non-coding upstream 290233 29792516 ~ 29794205 (+)
G73169 NA non-coding upstream 318332 29765120 ~ 29766106 (+)
G73155 NA non-coding upstream 351075 29732651 ~ 29733363 (+)
G73545 NA non-coding downstream 25793 30110612 ~ 30111156 (+)
G73567 NA non-coding downstream 27570 30112389 ~ 30112630 (+)
G73568 NA non-coding downstream 33187 30118006 ~ 30118492 (+)
G73571 NA non-coding downstream 38204 30123023 ~ 30123250 (+)
G73576 NA non-coding downstream 45661 30130480 ~ 30130707 (+)
zgc:153115 LOC108268059 other upstream 403263 29673514 ~ 29681175 (+)
asip2b NA other upstream 460641 29619993 ~ 29623797 (+)
fubp1 fubp1 other upstream 888289 29181767 ~ 29196149 (+)
G72873 NA other upstream 1172334 28874356 ~ 28912104 (+)
selenot1a selenot,selt1a,LOC107681817,LOC107708642 other upstream 1287279 28792847 ~ 28797159 (+)
uggt1 uggt1,LOC107748935,LOC107683622,LOC107727334 other downstream 369938 30454757 ~ 30478293 (+)
G73944 NA other downstream 661312 30746131 ~ 30767132 (+)
spsb4a spsb4a,LOC108267127,LOC108440634,LOC103021520,LOC107706335,LOC107561810,LOC107694659,LOC107583109 other downstream 976911 31061730 ~ 31097929 (+)
c4h22orf39 c7h22orf39 other downstream 1266382 31351201 ~ 31353144 (+)
LOC113540067 NA other downstream 1675070 31759889 ~ 31776798 (+)

Expression


Co-expression Network