G73568


Basic Information

Item Value
gene id G73568
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 30118006 ~ 30118492 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU87176
tgttttataAAAGTTCATTTGTGACTCTTTTCTTAGATGATGACAATTTTTTTGACTTCTTAGCTAGAGCTAAAggtattttgcatgtttttacCCAGAATTCATTGCTGTTAAGGTTTGGGTATTGGCTTTTGTTTTCATACTACTCGTATTTCCTTCTCCAGATAAACTTCTAGGCCTTCATTTTGCTTTCCTAACACCCAAATCTACCAACTTGCCCAGGTTCAATAACATACCATAACAAATTTATATCTCTATATTCAGTGTTTTTGGCGCCAAAACACGCGCGTGCGGCACTGAGGCGCTTTTCTGAGGCGGTTTCTTCCGTCCAAAACAAACGAATAACATCTCACTATCTACCCAgagctgtctttctttctgtataaacgtgtaaatgtttaaaatctgtaTATATGTGATACTGTTCGGTTAGTTTACTAAGCGTGAGAGACACACGACGGCGAAATCTAAACTGTGCTCAACACTT

Function

NR:

description
PREDICTED: receptor-type tyrosine-protein phosphatase zeta-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87176 True 487 lncRNA 0.38 1 30118006 30118492

Neighbor

gene id symbol gene type direction distance location
keap1a keap1a,LOC108268010,LOC108428896,LOC107721712,LOC107690048,LOC107588875,LOC107749088 coding upstream 8171 30097705 ~ 30109835 (+)
ebi3 LOC108267125 coding upstream 67516 30045895 ~ 30050490 (+)
blvra blvra coding upstream 95435 30014655 ~ 30022571 (+)
rgs13 LOC108268340 coding upstream 116661 29998504 ~ 30001345 (+)
rgs1 LOC108267137 coding upstream 128571 29986185 ~ 29989435 (+)
zgc:110158 zgc:110158,LOC108267812,LOC108428898,LOC107678694,LOC105906991,LOC107690032 coding downstream 20511 30139003 ~ 30194574 (+)
znf622 znf622,LOC107721690 coding downstream 81202 30199694 ~ 30204010 (+)
d2hgdh d2hgdh coding downstream 86706 30205198 ~ 30211975 (+)
otomp otomp,LOC108267868,LOC108428860,LOC107602611,LOC107690301 coding downstream 106551 30225043 ~ 30237040 (+)
hs6st1a hs6st1a,hs6st1b,LOC108267822,LOC107727332,LOC107748934,LOC107678693,LOC107588870 coding downstream 220378 30338870 ~ 30447632 (+)
G73567 NA non-coding upstream 5376 30112389 ~ 30112630 (+)
G73545 NA non-coding upstream 6850 30110612 ~ 30111156 (+)
G73564 NA non-coding upstream 33187 30084438 ~ 30084819 (+)
G73533 NA non-coding upstream 85218 30032310 ~ 30032788 (+)
G73512 NA non-coding upstream 187838 29929938 ~ 29930168 (+)
G73571 NA non-coding downstream 4531 30123023 ~ 30123250 (+)
G73576 NA non-coding downstream 11988 30130480 ~ 30130707 (+)
G73578 NA non-coding downstream 16160 30134652 ~ 30134865 (+)
G73590 NA non-coding downstream 31963 30150455 ~ 30192334 (+)
G73839 NA non-coding downstream 362930 30481422 ~ 30481625 (+)
zgc:153115 LOC108268059 other upstream 436831 29673514 ~ 29681175 (+)
asip2b NA other upstream 494209 29619993 ~ 29623797 (+)
fubp1 fubp1 other upstream 921857 29181767 ~ 29196149 (+)
G72873 NA other upstream 1205902 28874356 ~ 28912104 (+)
selenot1a selenot,selt1a,LOC107681817,LOC107708642 other upstream 1320847 28792847 ~ 28797159 (+)
uggt1 uggt1,LOC107748935,LOC107683622,LOC107727334 other downstream 336265 30454757 ~ 30478293 (+)
G73944 NA other downstream 627639 30746131 ~ 30767132 (+)
spsb4a spsb4a,LOC108267127,LOC108440634,LOC103021520,LOC107706335,LOC107561810,LOC107694659,LOC107583109 other downstream 943238 31061730 ~ 31097929 (+)
c4h22orf39 c7h22orf39 other downstream 1232709 31351201 ~ 31353144 (+)
LOC113540067 NA other downstream 1641397 31759889 ~ 31776798 (+)

Expression


Co-expression Network