G74550


Basic Information

Item Value
gene id G74550
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 31880034 ~ 31880556 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU88353
cagaaatggctcaactatacaacttactgtacatagtgcgatacacaccactgattctcactctagctacagcaggcagttttgcagataaaatttgGCCAACAgatgaagataccaacattatcaggaaagaaacagacactgttactctgaaatgttcatatgagtcAAGCAGCAGTACCATTCGgctttactggtacaaacaatatcctaacagcgcaccacagtttttactgtataaaggcgCAAAGTCGCGAAGTTCTGAGGAGTACAATCCCTCTGGCACTCGATTCGAGTCAGAAACGACCTCagactctactgaacttactatcaAAGATCTGCAGATttcagattctgcactctatcactgcgctctcagagt

Function

GO: NA

KEGG:

id description
ko04660 T cell receptor signaling pathway
ko04659 Th17 cell differentiation
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
TU88353 True 382 TUCP 0.42 2 31880034 31880556

Neighbor

gene id symbol gene type direction distance location
nmnat2 nmnat2,LOC107658365,LOC107563562 coding downstream 152482 31710064 ~ 31727552 (-)
LOC113540064 NA coding downstream 335400 31538539 ~ 31544634 (-)
psmb5 psmb5,LOC107668975,LOC108438927,LOC107706341,LOC106569426 coding downstream 346776 31528370 ~ 31533258 (-)
LOC113540461 LOC108267708,LOC107591395 coding downstream 377656 31379473 ~ 31502378 (-)
LOC113540063 LOC108267709 coding downstream 515763 31360647 ~ 31364271 (-)
LOC117597140 NA coding upstream 943002 32823558 ~ 32825567 (-)
LOC117596924 NA coding upstream 954483 32835039 ~ 32835722 (-)
LOC117596934 NA coding upstream 963545 32844101 ~ 32845270 (-)
LOC117597141 NA coding upstream 1092229 32972785 ~ 32977700 (-)
LOC117597142 NA coding upstream 1115800 32996356 ~ 32996892 (-)
LOC113540068 NA non-coding downstream 10026 31867082 ~ 31870008 (-)
G74458 NA non-coding downstream 94277 31736292 ~ 31785757 (-)
G74457 NA non-coding downstream 123730 31753121 ~ 31756304 (-)
G74479 NA non-coding downstream 134572 31744351 ~ 31745462 (-)
G74417 NA non-coding downstream 229450 31567051 ~ 31650584 (-)
G74553 NA non-coding upstream 13295 31893851 ~ 31901557 (-)
LOC117597178 NA non-coding upstream 28092 31908648 ~ 31909914 (-)
LOC117597180 NA non-coding upstream 50749 31931305 ~ 31932063 (-)
LOC113540655 NA non-coding upstream 231030 32111586 ~ 32112411 (-)
LOC117595679 NA non-coding upstream 245016 32125572 ~ 32126462 (-)
G74547 NA other downstream 5207 31874309 ~ 31874827 (-)
LOC117597010 NA other downstream 8160 31870518 ~ 31871874 (-)
rem2 rem2,LOC108268350,LOC108442842,LOC107706340,LOC107567555,LOC107694663,LOC107583115,LOC107738122 other downstream 602785 31247060 ~ 31277249 (-)
ccl20l LOC100304631 other downstream 1104215 30773449 ~ 30775819 (-)
LOC113540055 LOC108268301 other downstream 1129066 30741527 ~ 30750968 (-)
LOC117597011 NA other upstream 2387 31882943 ~ 31883607 (-)
LOC117597121 NA other upstream 25070 31905626 ~ 31910974 (-)
G74607 NA other upstream 186256 32066812 ~ 32067337 (-)
LOC117596957 NA other upstream 193827 32074383 ~ 32113455 (-)
LOC117596961 NA other upstream 251395 32131951 ~ 32132467 (-)

Expression


Co-expression Network