G74607


Basic Information

Item Value
gene id G74607
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 32066812 ~ 32067337 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU88423
gctaagaccattcatcatgttcactgttatattcatgtgtctgtggctttcactaggtgactccatggcagattcaatacagccacttttcACAACTCCtaaagttgtagatgaaggtgttaatgttactctgtcctgcaaataTGACACTACCAGTACTGCAGCAAACACCTACCTGcactggtacagacaatatccaaaatctaaacctgagttccttctgTACATCACTGCAAGTGGACAGAAAAATGTCCCTATTTCACCACATCTGTCTGCTGAAgttgatgataaaaataaacgagtggatcttctcatctcctctgctgctgtgtcagactctgcactatactactgtgctctcg

Function

GO:

id name namespace
GO:0046980 tapasin binding molecular_function

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU88423 True 362 TUCP 0.42 2 32066812 32067337

Neighbor

gene id symbol gene type direction distance location
nmnat2 nmnat2,LOC107658365,LOC107563562 coding downstream 339260 31710064 ~ 31727552 (-)
LOC113540064 NA coding downstream 522178 31538539 ~ 31544634 (-)
psmb5 psmb5,LOC107668975,LOC108438927,LOC107706341,LOC106569426 coding downstream 533554 31528370 ~ 31533258 (-)
LOC113540461 LOC108267708,LOC107591395 coding downstream 564434 31379473 ~ 31502378 (-)
LOC113540063 LOC108267709 coding downstream 702541 31360647 ~ 31364271 (-)
LOC117597140 NA coding upstream 756221 32823558 ~ 32825567 (-)
LOC117596924 NA coding upstream 767702 32835039 ~ 32835722 (-)
LOC117596934 NA coding upstream 776764 32844101 ~ 32845270 (-)
LOC117597141 NA coding upstream 905448 32972785 ~ 32977700 (-)
LOC117597142 NA coding upstream 929019 32996356 ~ 32996892 (-)
LOC117597180 NA non-coding downstream 134749 31931305 ~ 31932063 (-)
LOC117597178 NA non-coding downstream 156898 31908648 ~ 31909914 (-)
G74553 NA non-coding downstream 165255 31893851 ~ 31901557 (-)
LOC113540068 NA non-coding downstream 196804 31867082 ~ 31870008 (-)
G74458 NA non-coding downstream 281055 31736292 ~ 31785757 (-)
LOC113540655 NA non-coding upstream 44249 32111586 ~ 32112411 (-)
LOC117595679 NA non-coding upstream 58235 32125572 ~ 32126462 (-)
G74619 NA non-coding upstream 96717 32164054 ~ 32164414 (-)
G74622 NA non-coding upstream 133028 32200365 ~ 32200804 (-)
LOC117596963 NA non-coding upstream 134744 32202081 ~ 32202854 (-)
LOC117597121 NA other downstream 155838 31905626 ~ 31910974 (-)
LOC117597011 NA other downstream 183205 31882943 ~ 31883607 (-)
G74550 NA other downstream 186256 31880034 ~ 31880556 (-)
G74547 NA other downstream 191985 31874309 ~ 31874827 (-)
LOC117597010 NA other downstream 194938 31870518 ~ 31871874 (-)
LOC117596957 NA other upstream 7046 32074383 ~ 32113455 (-)
LOC117596961 NA other upstream 64614 32131951 ~ 32132467 (-)
LOC117596956 NA other upstream 77122 32144459 ~ 32144943 (-)
G74615 NA other upstream 81858 32149195 ~ 32149797 (-)
LOC113540132 NA other upstream 101245 32168582 ~ 32169236 (-)

Expression


Co-expression Network