Gene
RNA
| Item | Value |
|---|---|
| gene id | G74672 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 32896804 ~ 32924735 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU88495 | True | 247 | lncRNA | 0.53 | 2 | 32896804 | 32924735 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117597132 | NA | coding | upstream | 369144 | 32524877 ~ 32527660 (+) |
| LOC117596939 | NA | coding | upstream | 403180 | 32492958 ~ 32493624 (+) |
| LOC117596954 | NA | coding | upstream | 420041 | 32476272 ~ 32476763 (+) |
| LOC117597131 | NA | coding | upstream | 491703 | 32404548 ~ 32405101 (+) |
| LOC117596953 | NA | coding | upstream | 499407 | 32396906 ~ 32397397 (+) |
| chd8 | chd8,LOC108267737,LOC107738141,LOC107591376,LOC107704282 | coding | downstream | 249739 | 33174474 ~ 33249659 (+) |
| gpr25 | LOC108267152 | coding | downstream | 332494 | 33257229 ~ 33259292 (+) |
| LOC117596944 | NA | non-coding | upstream | 15439 | 32880711 ~ 32881365 (+) |
| LOC117596969 | NA | non-coding | upstream | 156693 | 32738103 ~ 32740111 (+) |
| G74655 | NA | non-coding | upstream | 189306 | 32707093 ~ 32707498 (+) |
| LOC117596955 | NA | non-coding | upstream | 336035 | 32560263 ~ 32560769 (+) |
| LOC117597133 | NA | non-coding | upstream | 343500 | 32542925 ~ 32553304 (+) |
| LOC117596970 | NA | non-coding | downstream | 1881 | 32926616 ~ 32927014 (+) |
| G74686 | NA | non-coding | downstream | 99241 | 33023976 ~ 33024331 (+) |
| G74747 | NA | non-coding | downstream | 200933 | 33125668 ~ 33125884 (+) |
| G74750 | NA | non-coding | downstream | 223802 | 33148537 ~ 33149053 (+) |
| LOC117597138 | NA | other | upstream | 149011 | 32745500 ~ 32747793 (+) |
| LOC117596925 | NA | other | upstream | 153667 | 32742265 ~ 32743137 (+) |
| LOC117597137 | NA | other | upstream | 160533 | 32721824 ~ 32736271 (+) |
| LOC117596949 | NA | other | upstream | 176340 | 32713173 ~ 32720464 (+) |
| mmp14b | mmp14b,LOC108267723,LOC103041213,LOC108438939 | other | downstream | 205308 | 33130043 ~ 33148431 (+) |
