G74686


Basic Information

Item Value
gene id G74686
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 33023976 ~ 33024331 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU88509
gctgtgttcagaaatggctcaactatacaacttactgtacatagtgagatacacaccactgattctcactctagctacagcaggcagttttgcagataaaattgggccgAAGGATaaagataccaacattatcgggaaagaaacagacactgttactctgaaatgttcatatgagacAAACAGCAATTACATTTGgctttactggtacaaacaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88509 True 215 lncRNA 0.39 2 33023976 33024331

Neighbor

gene id symbol gene type direction distance location
LOC117597132 NA coding upstream 496316 32524877 ~ 32527660 (+)
LOC117596939 NA coding upstream 530352 32492958 ~ 32493624 (+)
LOC117596954 NA coding upstream 547213 32476272 ~ 32476763 (+)
LOC117597131 NA coding upstream 618875 32404548 ~ 32405101 (+)
LOC117596953 NA coding upstream 626579 32396906 ~ 32397397 (+)
chd8 chd8,LOC108267737,LOC107738141,LOC107591376,LOC107704282 coding downstream 150143 33174474 ~ 33249659 (+)
gpr25 LOC108267152 coding downstream 232898 33257229 ~ 33259292 (+)
LOC117596970 NA non-coding upstream 96962 32926616 ~ 32927014 (+)
G74672 NA non-coding upstream 99241 32896804 ~ 32924735 (+)
G74676 NA non-coding upstream 108003 32915540 ~ 32915973 (+)
LOC117596944 NA non-coding upstream 142611 32880711 ~ 32881365 (+)
LOC117596969 NA non-coding upstream 283865 32738103 ~ 32740111 (+)
G74747 NA non-coding downstream 101337 33125668 ~ 33125884 (+)
G74750 NA non-coding downstream 124206 33148537 ~ 33149053 (+)
LOC117597138 NA other upstream 276183 32745500 ~ 32747793 (+)
LOC117596925 NA other upstream 280839 32742265 ~ 32743137 (+)
LOC117597137 NA other upstream 287705 32721824 ~ 32736271 (+)
LOC117596949 NA other upstream 303512 32713173 ~ 32720464 (+)
mmp14b mmp14b,LOC108267723,LOC103041213,LOC108438939 other downstream 105712 33130043 ~ 33148431 (+)

Expression


Co-expression Network